chr1 : 177,779,297 177,779,902
605 bp 33 TFs 0 linked genes
This 605 bp open chromatin element has no linked target genes and is bound by 33 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:177,774,297 – 177,784,902
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
33 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 61 bp overlap
BRD4 6 datasets
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.BRD4.MCF-7_ARID1A-KO_4-OHT 605 bp overlap
ChIP MCF-7_parental GSE123284.BRD4.MCF-7_parental 486 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 424 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-pos 178 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 154 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 228 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 240 bp overlap
CTCF 5 datasets
ChIP GSC23 GSE139416.CTCF.GSC23 81 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 288 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 170 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 57 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 112 bp overlap
ESR1 2 datasets
ChIP MCF-7_SHCTR_E2_TNF GSE59530.ESR1.MCF-7_SHCTR_E2_TNF 129 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 302 bp overlap
EZH2 3 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 153 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 195 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 374 bp overlap
JUN 1 dataset
ChIP 786-O GSE86092.JUN.786-O 210 bp overlap
JUND 3 datasets
ChIP H1 ENCFF468JZD 231 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 152 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 127 bp overlap
KLF17 1 dataset
Motif DE_12h DE_12h-KLF17_MA1514.2 14 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_12h DE_12h-MEIS2_MA0774.1 8 bp overlap
MEIS3 1 dataset
Motif DE_12h DE_12h-MEIS3_MA0775.2 7 bp overlap
MNT 2 datasets
ChIP Hep-G2 ENCSR261EDU.MNT.Hep-G2 53 bp overlap
ChIP HepG2 ENCFF701PYP 87 bp overlap
MYOD1 3 datasets
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 536 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 159 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 157 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 448 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 193 bp overlap
POU5F1 5 datasets
ChIP BG03 GSE21614.POU5F1.BG03 158 bp overlap
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 222 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 469 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 605 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 230 bp overlap
PRDM14 2 datasets
ChIP NCCIT GSE71675.PRDM14.NCCIT 504 bp overlap
ChIP hESC GSE22767.PRDM14.hESC 248 bp overlap
PRDM15 1 dataset
ChIP WTC11 ENCFF108TMF 170 bp overlap
RAD21 2 datasets
ChIP neural ENCSR198ZYJ.RAD21.neural 98 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 89 bp overlap
SMARCC1 3 datasets
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 199 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 322 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 178 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 178 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 124 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 225 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 432 bp overlap
SPI1 1 dataset
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 84 bp overlap
STAT3 3 datasets
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 266 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 167 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 185 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 246 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 63 bp overlap
ZNF707 1 dataset
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap