chr9 : 26,043,401 – 26,044,098

697 bp 56 TFs 0 linked genes

This 697 bp open chromatin element has no linked target genes and is bound by 56 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

56 transcription factors

CTCF 1 dataset

ChIP glioblastoma_GBM3565 GSE139416.CTCF.glioblastoma_GBM3565 249 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 295 bp overlap

ERG 1 dataset

ChIP VCaP GSE49091.ERG.VCaP 238 bp overlap

ESR2 2 datasets

Motif DE_12h DE_12h-ESR2_MA0258.2 15 bp overlap

Motif DE_36h DE_36h-ESR2_MA0258.2 15 bp overlap

Ebf4 1 dataset

Motif DE_36h DE_36h-Ebf4_MA2122.1 11 bp overlap

FIGLA 2 datasets

Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap

Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap

GABPA 2 datasets

ChIP VCaP GSE49091.GABPA.VCaP 197 bp overlap

ChIP VCaP GSE49091.GABPA.VCaP 143 bp overlap

GATA4 1 dataset

ChIP DE DE-GATA4-1 375 bp overlap

GATA6 4 datasets

ChIP DE DE-GATA6-1 293 bp overlap

ChIP DE DE-GATA6-2 300 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 256 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 429 bp overlap

GRHL2 1 dataset

ChIP LNCaP GSE80256.GRHL2.LNCaP 248 bp overlap

HNF4A 2 datasets

Motif DE_36h DE_36h-HNF4A_MA0114.5 9 bp overlap

Motif DE_36h DE_36h-HNF4A_MA1494.2 14 bp overlap

HNF4G 1 dataset

Motif DE_36h DE_36h-HNF4G_MA0484.3 9 bp overlap

Hnf1A 1 dataset

Motif DE_36h DE_36h-Hnf1A_MA1991.2 10 bp overlap

MEIS1 1 dataset

Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap

MGA::EVX1 2 datasets

Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap

Motif DE_36h DE_36h-MGAEVX1_MA1960.2 11 bp overlap

NFATC3 1 dataset

Motif DE_36h DE_36h-NFATC3_MA0625.3 6 bp overlap

NR1H2::RXRA 1 dataset

Motif DE_36h DE_36h-NR1H2RXRA_MA0115.1 17 bp overlap

NR2C2 1 dataset

Motif DE_36h DE_36h-NR2C2_MA0504.2 14 bp overlap

NR2F1 1 dataset

Motif DE_36h DE_36h-NR2F1_MA1537.2 13 bp overlap

Nfatc1 1 dataset

Motif DE_36h DE_36h-Nfatc1_MA0624.3 6 bp overlap

Nfatc2 1 dataset

Motif DE_36h DE_36h-Nfatc2_MA0152.3 8 bp overlap

Nr2e3 1 dataset

Motif DE_36h DE_36h-Nr2e3_MA0164.2 6 bp overlap

Nr2f6 1 dataset

Motif DE_36h DE_36h-Nr2f6_MA0677.2 13 bp overlap

PGR 2 datasets

Motif DE_12h DE_12h-PGR_MA2327.1 9 bp overlap

Motif DE_36h DE_36h-PGR_MA2327.1 9 bp overlap

PKNOX1 2 datasets

Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap

Motif DE_36h DE_36h-PKNOX1_MA0782.3 10 bp overlap

PPARD 1 dataset

Motif DE_36h DE_36h-PPARD_MA1550.2 14 bp overlap

PPARG 1 dataset

ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 171 bp overlap

Pparg::Rxra 1 dataset

Motif DE_36h DE_36h-PpargRxra_MA0065.3 13 bp overlap

RXRB 1 dataset

Motif DE_36h DE_36h-RXRB_MA0855.1 14 bp overlap

RXRG 1 dataset

Motif DE_36h DE_36h-RXRG_MA0856.1 14 bp overlap

Rxra 1 dataset

Motif DE_36h DE_36h-Rxra_MA0512.2 14 bp overlap

SMAD2-3 2 datasets

ChIP HGrC1_C134W GSE138496.SMAD2-3.HGrC1_C134W 146 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 580 bp overlap

SMAD2_3 1 dataset

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 257 bp overlap

SMAD3 1 dataset

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 136 bp overlap

SOX10 1 dataset

Motif DE_36h DE_36h-SOX10_MA0442.3 6 bp overlap

SOX2 1 dataset

ChIP RENVM GSE49404.SOX2.RENVM 205 bp overlap

SOX4 1 dataset

Motif DE_36h DE_36h-SOX4_MA0867.3 8 bp overlap

SPIB 1 dataset

Motif DE_36h DE_36h-SPIB_MA0081.3 13 bp overlap

Sox6 1 dataset

Motif DE_36h DE_36h-Sox6_MA0515.1 10 bp overlap

Spz1 1 dataset

Motif DE_12h DE_12h-Spz1_MA0111.1 11 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 233 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 227 bp overlap

TBX21 2 datasets

Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap

Motif DE_36h DE_36h-TBX21_MA0690.3 10 bp overlap

TCF7L2 1 dataset

Motif DE_36h DE_36h-TCF7L2_MA0523.2 9 bp overlap

THRB 1 dataset

Motif DE_36h DE_36h-THRB_MA1574.2 13 bp overlap

Tbx6 3 datasets

Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap

Motif DE_36h DE_36h-Tbx6_MA1567.3 9 bp overlap

ZBTB26 1 dataset

Motif DE_36h DE_36h-ZBTB26_MA1579.2 8 bp overlap

ZEB1 2 datasets

Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap

Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap

ZNF143 1 dataset

ChIP HeLa GSE39263.ZNF143.HeLa 234 bp overlap

ZNF189 3 datasets

Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap

Motif DE_36h DE_36h-ZNF189_MA1725.2 9 bp overlap

ZNF24 2 datasets

Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap

Motif DE_36h DE_36h-ZNF24_MA1124.1 13 bp overlap

ZNF300 1 dataset

ChIP HEK293T GSE78099.ZNF300.HEK293T 296 bp overlap

ZNF324 1 dataset

Motif DE_36h DE_36h-ZNF324_MA1977.2 14 bp overlap

ZNF341 2 datasets

Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap

Motif DE_36h DE_36h-ZNF341_MA1655.2 8 bp overlap

ZNF343 1 dataset

Motif DE_36h DE_36h-ZNF343_MA1711.2 16 bp overlap

ZNF692 2 datasets

Motif DE_12h DE_12h-ZNF692_MA1986.2 8 bp overlap

Motif DE_36h DE_36h-ZNF692_MA1986.2 8 bp overlap

Zfp335 1 dataset

Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap