chr9 : 19,372,546 19,372,968
422 bp 44 TFs 2 linked genes
This 422 bp open chromatin element is linked to ENSG00000273226 and RPS6 and is bound by 44 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000273226 2.5 kb Proximal Proximity
RPS6 7.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:19,367,546 – 19,377,968
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
44 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP K-562 ENCSR641BSL.AGO1.K-562 89 bp overlap
ChIP K-562 GSE120104.AGO1.K-562 80 bp overlap
AR 2 datasets
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 209 bp overlap
ChIP WTC11 ENCFF267GQJ 317 bp overlap
BRD4 1 dataset
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 83 bp overlap
CTCF 1 dataset
ChIP 22Rv1 ENCFF466OXN 130 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 319 bp overlap
ELF4 1 dataset
ChIP HEK293T ENCFF509MGU 83 bp overlap
EMX1 1 dataset
ChIP WTC11 ENCFF692RZJ 422 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 211 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
FOS 1 dataset
ChIP MG-63-3 GSE74230.FOS.MG-63-3 58 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 228 bp overlap
KMT2A 1 dataset
ChIP OCI-AML-3_DMSO GSE129636.KMT2A.OCI-AML-3_DMSO 120 bp overlap
MAFK 1 dataset
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MYBL2 1 dataset
ChIP MCF-10A_DOX GSE115787.MYBL2.MCF-10A_DOX 231 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 252 bp overlap
NCAPH2 2 datasets
ChIP IMR-90_FLAG_G GSE118494.NCAPH2.IMR-90_FLAG_G 217 bp overlap
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 307 bp overlap
NKX2-2 1 dataset
Motif DE_12h DE_12h-NKX2-2_MA1645.2 8 bp overlap
NR3C1 2 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 422 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 266 bp overlap
PBX3 1 dataset
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
PKNOX1 2 datasets
Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap
ChIP HEK293T ENCFF174WDB 84 bp overlap
PML 1 dataset
ChIP GM12878 ENCSR000BQM.PML.GM12878 71 bp overlap
POLR2A 31 datasets
ChIP GM12878 ENCFF263VRI 404 bp overlap
ChIP GM12878 ENCFF263VRI 176 bp overlap
ChIP GM12878 ENCFF631ERR 422 bp overlap
ChIP GM12891 ENCFF379FCI 228 bp overlap
ChIP GM12892 ENCFF245LYF 422 bp overlap
ChIP GM18951 ENCFF079KKO 422 bp overlap
ChIP GM23338 ENCFF450WCS 355 bp overlap
ChIP H1 ENCFF566JSR 266 bp overlap
ChIP H1 ENCFF770YBQ 406 bp overlap
ChIP H1 ENCFF833NJP 127 bp overlap
ChIP HeLa-S3 ENCFF045HUU 405 bp overlap
ChIP HeLa-S3 ENCFF224LWS 422 bp overlap
ChIP HeLa-S3 ENCFF224LWS 422 bp overlap
ChIP HeLa-S3 ENCFF224LWS 251 bp overlap
ChIP HeLa-S3 ENCFF773DNG 422 bp overlap
ChIP HeLa-S3 ENCFF773DNG 183 bp overlap
ChIP HepG2 ENCFF252NAR 422 bp overlap
ChIP HepG2 ENCFF252NAR 261 bp overlap
ChIP HepG2 ENCFF350RIU 422 bp overlap
ChIP K562 ENCFF215CWW 422 bp overlap
ChIP K562 ENCFF643HGX 176 bp overlap
ChIP K562 ENCFF643HGX 359 bp overlap
ChIP MCF-7 ENCFF164XWP 364 bp overlap
ChIP MCF-7 ENCFF164XWP 80 bp overlap
ChIP NB4 ENCFF780KAX 67 bp overlap
ChIP SK-N-MC ENCFF088IVG 422 bp overlap
ChIP endothelial cell of umbilical vein ENCFF467WJF 422 bp overlap
ChIP endothelial cell of umbilical vein ENCFF467WJF 188 bp overlap
ChIP spleen ENCFF446ZGT 204 bp overlap
ChIP spleen ENCFF446ZGT 401 bp overlap
ChIP spleen ENCFF706IUS 410 bp overlap
POLR2G 2 datasets
ChIP HepG2 ENCFF241AEG 189 bp overlap
ChIP K562 ENCFF648YPL 177 bp overlap
RBM22 2 datasets
ChIP HepG2 ENCFF292RVQ 117 bp overlap
ChIP HepG2 ENCFF561IAJ 124 bp overlap
SREBF1 1 dataset
Motif DE_12h DE_12h-SREBF1_MA0595.1 10 bp overlap
SREBF2 1 dataset
Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap
SSRP1 1 dataset
ChIP hiF-T GSE98758.SSRP1.hiF-T 287 bp overlap
SUPT5H 6 datasets
ChIP DLD-1_NELFE-AID_treated GSE144786.SUPT5H.DLD-1_NELFE-AID_treated 173 bp overlap
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 74 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 50 bp overlap
ChIP U2OS_DMSO GSE115365.SUPT5H.U2OS_DMSO 166 bp overlap
ChIP U2OS_siCtrl GSE115365.SUPT5H.U2OS_siCtrl 69 bp overlap
ChIP U2OS_siMYC GSE115365.SUPT5H.U2OS_siMYC 94 bp overlap
TFAP2C 1 dataset
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
TOP1 1 dataset
ChIP LNCaP GSE63202.TOP1.LNCaP 96 bp overlap
Tfcp2l1 1 dataset
Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap
ZNF121 4 datasets
ChIP HEK293 ENCFF839FUF 378 bp overlap
ChIP HEK293 ENCSR224QDY.ZNF121.HEK293 282 bp overlap
ChIP K562 ENCFF314GND 307 bp overlap
ChIP WTC11 ENCFF291API 287 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF384 2 datasets
ChIP HEK293T ENCFF019DZX 299 bp overlap
ChIP HEK293T ENCSR882ICT.ZNF384.HEK293T 261 bp overlap
ZNF664 2 datasets
ChIP HEK293 ENCFF343XSW 173 bp overlap
ChIP HEK293 ENCSR714LZQ.ZNF664.HEK293 184 bp overlap