chr8 : 131,896,508 131,896,710
202 bp 38 TFs 1 linked gene
This 202 bp open chromatin element is linked to EFR3A and is bound by 38 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
EFR3A 7.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:131,891,508 – 131,901,710
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
38 transcription factors
Source
Cell type
BCL11A 2 datasets
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 119 bp overlap
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 135 bp overlap
BRD2 2 datasets
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 140 bp overlap
ChIP K-562 GSE140325.BRD2.K-562 137 bp overlap
CTCF 165 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 202 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 202 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 186 bp overlap
ChIP A549 ENCFF034FVO 202 bp overlap
ChIP AG04449 ENCFF248MBD 178 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 201 bp overlap
ChIP D721Med ENCFF513FYD 170 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 173 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 198 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 202 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 162 bp overlap
ChIP GM12875 ENCSR000DRU.CTCF.GM12875 104 bp overlap
ChIP GM13977 ENCFF528ESQ 142 bp overlap
ChIP GM13977 ENCSR000DLB.CTCF.GM13977 113 bp overlap
ChIP GM23338 ENCFF531QOI 143 bp overlap
ChIP GM23338 ENCFF772DML 175 bp overlap
ChIP H1 ENCFF414GZI 202 bp overlap
ChIP H1 ENCFF764RHO 202 bp overlap
ChIP H9 ENCFF152GTF 198 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 202 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 202 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 202 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 199 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 202 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 198 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 202 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 147 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 202 bp overlap
ChIP HCT116 ENCFF003KHP 202 bp overlap
ChIP HCT116 ENCFF209YMI 202 bp overlap
ChIP HEC-1-B GSE139679.CTCF.HEC-1-B 156 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 169 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 105 bp overlap
ChIP HFFc6 ENCFF005CJI 202 bp overlap
ChIP HUDEP-2_30min GSE104676.CTCF.HUDEP-2_30min 90 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 189 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 189 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 171 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 202 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 202 bp overlap
ChIP HeLa-S3 ENCFF255ASZ 202 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 202 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 150 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 202 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 120 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 175 bp overlap
ChIP HepG2 ENCFF127KUP 170 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 202 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 181 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 195 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 193 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 156 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 134 bp overlap
ChIP K-562_12040 GSE131349.CTCF.K-562_12040 169 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 171 bp overlap
ChIP K-562_13189 GSE131349.CTCF.K-562_13189 150 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 157 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 159 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 175 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 154 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 202 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 147 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 162 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 202 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 130 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.CTCF.K-562_dCas9-KRAB 202 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 202 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 202 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 202 bp overlap
ChIP K562 ENCFF082GOI 185 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 202 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 166 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 172 bp overlap
ChIP MCF-7 ENCFF139NQI 202 bp overlap
ChIP MCF-7 ENCFF162GNE 202 bp overlap
ChIP MCF-7 ENCFF198DQX 202 bp overlap
ChIP MCF-7 ENCFF210JUZ 202 bp overlap
ChIP MCF-7 ENCFF414SZG 172 bp overlap
ChIP MCF-7 ENCFF424NQR 172 bp overlap
ChIP MCF-7 ENCFF494VXA 202 bp overlap
ChIP MCF-7 ENCFF844STM 172 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 202 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 202 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 184 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 182 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 109 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 133 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 202 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 191 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 202 bp overlap
ChIP MCF-7L_t4 GSE108787.CTCF.MCF-7L_t4 161 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 125 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 112 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 187 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 202 bp overlap
ChIP PC-3 ENCFF487TUI 172 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 202 bp overlap
ChIP PC-9 ENCFF539ULB 202 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 188 bp overlap
ChIP SK-N-SH ENCFF575DMG 202 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 202 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 202 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 116 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 171 bp overlap
ChIP VCaP ENCFF858YQT 202 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 159 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 129 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 121 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 143 bp overlap
ChIP ascending-aorta ENCSR555DCD.CTCF.ascending-aorta 151 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 202 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 147 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 125 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 202 bp overlap
ChIP endodermal cell ENCFF471YCZ 202 bp overlap
ChIP endodermal cell ENCFF471YCZ 115 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 157 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ALA.CTCF.endothelial_umbilical-vein 176 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 202 bp overlap
ChIP erythroid_Don002 GSE137982.CTCF.erythroid_Don002 135 bp overlap
ChIP fetal_erythroblasts GSE102184.CTCF.fetal_erythroblasts 171 bp overlap
ChIP fibroblast of dermis ENCFF986DNJ 202 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 145 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DWQ.CTCF.fibroblast_FORESKIN 160 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 150 bp overlap
ChIP fibroblast_SKIN_ABDOMEN ENCSR000DPV.CTCF.fibroblast_SKIN_ABDOMEN 137 bp overlap
ChIP fibroblast_SKIN_LEG ENCSR000DPG.CTCF.fibroblast_SKIN_LEG 100 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 149 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 202 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 181 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 149 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 165 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 202 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 202 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 163 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 178 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 169 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 201 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 186 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 173 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 165 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 134 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 121 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 202 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 202 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 162 bp overlap
ChIP lung ENCSR463XCZ.CTCF.lung 201 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 103 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ANE.CTCF.myoblast_skeletal_muscle 182 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 196 bp overlap
ChIP neural progenitor cell ENCFF420RBO 202 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 174 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 109 bp overlap
ChIP osteoblast ENCFF491ZJZ 202 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 202 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 202 bp overlap
ChIP stomach ENCFF370OWL 202 bp overlap
ChIP stomach ENCSR185CCV.CTCF.stomach 202 bp overlap
ChIP thyroid gland ENCFF300RYK 202 bp overlap
ChIP thyroid gland ENCFF748ICQ 202 bp overlap
ChIP thyroid-gland ENCSR955BIB.CTCF.thyroid-gland 197 bp overlap
ChIP thyroid-gland ENCSR145HBC.CTCF.thyroid-gland 202 bp overlap
ChIP thyroid-gland ENCSR492ZIW.CTCF.thyroid-gland 202 bp overlap
ChIP thyroid-gland ENCSR033KMZ.CTCF.thyroid-gland 201 bp overlap
ChIP thyroid-gland ENCSR744YJR.CTCF.thyroid-gland 167 bp overlap
ESR1 10 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 193 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 202 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 195 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 202 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 202 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 202 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 202 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 185 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 200 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 191 bp overlap
EZH2 1 dataset
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 202 bp overlap
FOXA1 11 datasets
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 101 bp overlap
ChIP MCF-7 GSE80808.FOXA1.MCF-7 129 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 202 bp overlap
ChIP MCF-7 GSE72249.FOXA1.MCF-7 174 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 123 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 202 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 175 bp overlap
ChIP MCF-7_JC4691 GSE126004.FOXA1.MCF-7_JC4691 202 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 195 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 172 bp overlap
ChIP prostate-cancer_PDX_136 GSE130408.FOXA1.prostate-cancer_PDX_136 171 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 202 bp overlap
ChIP DE DE-FOXA2-2 202 bp overlap
FOXK2 1 dataset
ChIP K-562 ENCSR508DQA.FOXK2.K-562 129 bp overlap
GATA1 1 dataset
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 64 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 111 bp overlap
HAND2 1 dataset
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR075HTM.HDAC2.K-562 202 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 202 bp overlap
HMBOX1 2 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 202 bp overlap
ChIP K562 ENCFF317JJX 202 bp overlap
HNRNPK 2 datasets
ChIP HepG2 ENCFF493GNS 53 bp overlap
ChIP HepG2 ENCFF826MXP 53 bp overlap
JUN 1 dataset
Motif ES_0h ES_0h-JUN_MA0488.2 10 bp overlap
JUND 1 dataset
Motif ES_0h ES_0h-JUND_MA0492.2 11 bp overlap
KLF4 1 dataset
ChIP MCF-7 ENCFF948KTQ 202 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 168 bp overlap
NFE2 1 dataset
ChIP K-562 ENCSR000FCC.NFE2.K-562 117 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 202 bp overlap
ChIP K562 ENCFF286KMN 202 bp overlap
PKNOX1 3 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 158 bp overlap
ChIP MCF-7 ENCFF116OCS 139 bp overlap
ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 202 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 202 bp overlap
PRDM10 2 datasets
ChIP K-562 ENCSR120MPG.PRDM10.K-562 78 bp overlap
ChIP K562 ENCFF740YLK 130 bp overlap
Plagl1 1 dataset
Motif ES_0h ES_0h-Plagl1_MA1615.2 8 bp overlap
RAD21 7 datasets
ChIP H1 ENCFF698EWO 202 bp overlap
ChIP HCT-116 GSE121355.RAD21.HCT-116 189 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 104 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 189 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 199 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 158 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 195 bp overlap
SMC3 1 dataset
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 202 bp overlap
SREBF2 1 dataset
Motif ES_0h ES_0h-SREBF2_MA0596.1 10 bp overlap
STAG1 2 datasets
ChIP MCF-7 ERP000209.STAG1.MCF-7 127 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 167 bp overlap
STAT3 1 dataset
ChIP MCF-7_jc5848 GSE126004.STAT3.MCF-7_jc5848 202 bp overlap
THRA 1 dataset
Motif ES_0h ES_0h-THRA_MA1969.2 18 bp overlap
TWIST1 1 dataset
Motif ES_0h ES_0h-TWIST1_MA1123.3 8 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 119 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 139 bp overlap
Zfp809 1 dataset
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap