Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

49 transcription factors

AR 1 dataset

ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 289 bp overlap

BRD4 4 datasets

ChIP SUM159PT_100nMtrametinib300nMJQ1_24h GSE87418.BRD4.SUM159PT_100nMtrametinib300nMJQ1_24h 120 bp overlap

ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 119 bp overlap

ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 183 bp overlap

ChIP SUM159PT_DMSO_8h GSE87418.BRD4.SUM159PT_DMSO_8h 65 bp overlap

CHD4 1 dataset

ChIP SCMC GSE155861.CHD4.SCMC 306 bp overlap

CRX 3 datasets

ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 330 bp overlap

ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 294 bp overlap

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 413 bp overlap

CTCF 2 datasets

ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 273 bp overlap

ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 240 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF844FIP 393 bp overlap

DMRTC2 1 dataset

Motif DE_48h DE_48h-DMRTC2_MA1479.2 11 bp overlap

DPRX 3 datasets

Motif DE_36h DE_36h-DPRX_MA1480.2 9 bp overlap

Motif DE_48h DE_48h-DPRX_MA1480.2 9 bp overlap

Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap

DUX4 3 datasets

Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap

Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap

Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap

DUXA 1 dataset

Motif DE_48h DE_48h-DUXA_MA0884.2 13 bp overlap

EOMES 2 datasets

ChIP hESC GSE26097.EOMES.hESC 166 bp overlap

ChIP hESC GSE26097.EOMES.hESC 317 bp overlap

EP300 1 dataset

ChIP tibial nerve ENCFF346AYA 90 bp overlap

FOXA1 1 dataset

ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 208 bp overlap

FOXA2 7 datasets

ChIP BJ1-hTERT_CDT1 GSE92491.FOXA2.BJ1-hTERT_CDT1 99 bp overlap

ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 124 bp overlap

ChIP BJ1-hTERT_Mimo GSE92491.FOXA2.BJ1-hTERT_Mimo 89 bp overlap

ChIP BJ1-hTERT_MimosinePlus GSE90454.FOXA2.BJ1-hTERT_MimosinePlus 82 bp overlap

ChIP BJ1-hTERT_MimosineRelease GSE90454.FOXA2.BJ1-hTERT_MimosineRelease 63 bp overlap

ChIP DE DE-FOXA2-1 507 bp overlap

ChIP DE DE-FOXA2-2 619 bp overlap

Foxl2 3 datasets

Motif DE_36h DE_36h-Foxl2_MA1607.2 10 bp overlap

Motif DE_48h DE_48h-Foxl2_MA1607.2 10 bp overlap

Motif DE_60h DE_60h-Foxl2_MA1607.2 10 bp overlap

GATA3 1 dataset

ChIP breast_tumor_Male_16 GSE104399.GATA3.breast_tumor_Male_16 329 bp overlap

GATA4 3 datasets

ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 126 bp overlap

ChIP DE DE-GATA4-1 558 bp overlap

ChIP DE DE-GATA4-2 619 bp overlap

GATA6 6 datasets

ChIP DE DE-GATA6-1 619 bp overlap

ChIP DE DE-GATA6-2 619 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 311 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 537 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 374 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 579 bp overlap

HIF1A 1 dataset

ChIP LNCaP_androgen-N_hypoxia-N GSE114732.HIF1A.LNCaP_androgen-N_hypoxia-N 143 bp overlap

HMBOX1 1 dataset

Motif DE_48h DE_48h-HMBOX1_MA0895.2 7 bp overlap

MAFK 1 dataset

ChIP IMR-90 ENCFF336DHZ 57 bp overlap

MBD2 1 dataset

ChIP MCF-7 GSE54693.MBD2.MCF-7 142 bp overlap

MEF2D 2 datasets

ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 191 bp overlap

ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 257 bp overlap

MEIS1 1 dataset

Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap

NEUROD1 5 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 555 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 569 bp overlap

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 289 bp overlap

ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 320 bp overlap

ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 274 bp overlap

NR1D1 3 datasets

Motif DE_36h DE_36h-NR1D1_MA1531.2 14 bp overlap

Motif DE_48h DE_48h-NR1D1_MA1531.2 14 bp overlap

Motif DE_60h DE_60h-NR1D1_MA1531.2 14 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 342 bp overlap

POU1F1 1 dataset

Motif DE_48h DE_48h-POU1F1_MA0784.3 14 bp overlap

POU2F2 1 dataset

Motif DE_48h DE_48h-POU2F2_MA0507.3 13 bp overlap

POU2F3 1 dataset

Motif DE_48h DE_48h-POU2F3_MA0627.3 9 bp overlap

POU3F3 1 dataset

Motif DE_48h DE_48h-POU3F3_MA0788.1 13 bp overlap

PPARA::RXRA 1 dataset

Motif DE_48h DE_48h-PPARARXRA_MA1148.2 17 bp overlap

Pparg::Rxra 1 dataset

Motif DE_48h DE_48h-PpargRxra_MA0065.3 13 bp overlap

RBPJ 3 datasets

Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap

Motif DE_48h DE_48h-RBPJ_MA1116.2 6 bp overlap

Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap

RORA 1 dataset

Motif DE_48h DE_48h-RORA_MA0072.2 11 bp overlap

RORB 1 dataset

ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 216 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 612 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 619 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 619 bp overlap

SMARCB1 1 dataset

ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 237 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 381 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 484 bp overlap

SRF 1 dataset

Motif DE_48h DE_48h-SRF_MA0083.3 16 bp overlap

STAT3 3 datasets

Motif DE_36h DE_36h-STAT3_MA0144.3 9 bp overlap

Motif DE_48h DE_48h-STAT3_MA0144.3 9 bp overlap

Motif DE_60h DE_60h-STAT3_MA0144.3 9 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 189 bp overlap

ZBTB24 1 dataset

Motif DE_48h DE_48h-ZBTB24_MA2330.1 10 bp overlap

ZNF341 3 datasets

Motif DE_36h DE_36h-ZNF341_MA1655.2 8 bp overlap

Motif DE_48h DE_48h-ZNF341_MA1655.2 8 bp overlap

Motif DE_60h DE_60h-ZNF341_MA1655.2 8 bp overlap

ZNF418 1 dataset

Motif DE_48h DE_48h-ZNF418_MA1980.1 15 bp overlap

ZNF75A 1 dataset

Motif DE_48h DE_48h-ZNF75A_MA2097.1 12 bp overlap

Zfp809 3 datasets

Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap

Motif DE_48h DE_48h-Zfp809_MA2125.1 9 bp overlap

Motif DE_60h DE_60h-Zfp809_MA2125.1 9 bp overlap

Genome Browser