chr8 : 50,526,044 – 50,526,416
372 bp 82 TFs 0 linked genes
This 372 bp open chromatin element has no linked target genes and is bound by 82 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:50,521,044 – 50,531,416
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
82 transcription factors
Source
Cell type
ALX3 1 dataset
Motif DE_12h DE_12h-ALX3_MA0634.2 6 bp overlap
CBX5 1 dataset
ChIP HCT-116 GSE135580.CBX5.HCT-116 284 bp overlap
CEBPG 1 dataset
Motif DE_12h DE_12h-CEBPG_MA1636.2 10 bp overlap
CTCF 126 datasets
ChIP A-549 ENCSR000DPF.CTCF.A-549 128 bp overlap
ChIP AG04450 ENCFF116DJL 220 bp overlap
ChIP Caco-2 ENCFF934QYS 167 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 113 bp overlap
ChIP GM23338 ENCFF531QOI 112 bp overlap
ChIP GM23338 ENCFF772DML 189 bp overlap
ChIP GM23338 ENCFF832KWE 336 bp overlap
ChIP GM23338 ENCFF832KWE 372 bp overlap
ChIP H9 ENCFF152GTF 181 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 190 bp overlap
ChIP HAP1 GSE94992.CTCF.HAP1 234 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 175 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 247 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 193 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 180 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 175 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 300 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 224 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 220 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 234 bp overlap
ChIP HEC-1-B_F-insertion GSE140868.CTCF.HEC-1-B_F-insertion 107 bp overlap
ChIP HEC-1-B_F-mutation GSE140868.CTCF.HEC-1-B_F-mutation 95 bp overlap
ChIP HEC-1-B_FFRR-insertion GSE140868.CTCF.HEC-1-B_FFRR-insertion 63 bp overlap
ChIP HEC-1-B_FFRR-mutation GSE140868.CTCF.HEC-1-B_FFRR-mutation 83 bp overlap
ChIP HEC-1-B_R1-insertion GSE140868.CTCF.HEC-1-B_R1-insertion 87 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 134 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.CTCF.HEC-1-B_RF-insertion 136 bp overlap
ChIP HEC-1-B_RF-mutation GSE140868.CTCF.HEC-1-B_RF-mutation 186 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 263 bp overlap
ChIP HEC-1-B_ac1-CBS-deletion GSE140868.CTCF.HEC-1-B_ac1-CBS-deletion 82 bp overlap
ChIP HEK293 ENCFF498RMM 213 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 185 bp overlap
ChIP HUDEP-2_30min GSE104676.CTCF.HUDEP-2_30min 78 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 154 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 154 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 175 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 159 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 175 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 247 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 133 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 228 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 139 bp overlap
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 233 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 90 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 80 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 235 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 270 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 245 bp overlap
ChIP MCF-7 ENCFF139NQI 208 bp overlap
ChIP MCF-7 ENCFF162GNE 207 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 138 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 143 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 157 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 140 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 230 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 178 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 212 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 115 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 213 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 156 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 170 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 204 bp overlap
ChIP RWPE2 ENCFF911IEE 372 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 138 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 130 bp overlap
ChIP SK-N-SH GSE76815.CTCF.SK-N-SH 147 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 108 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 355 bp overlap
ChIP SLK_RAD21-KD GSE138105.CTCF.SLK_RAD21-KD 248 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 111 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 160 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 125 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 184 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 109 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 224 bp overlap
ChIP VCaP ENCFF858YQT 372 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 286 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 90 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 224 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 200 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 223 bp overlap
ChIP astrocyte ENCSR000AOO.CTCF.astrocyte 197 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 286 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 155 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 274 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 191 bp overlap
ChIP endodermal cell ENCFF471YCZ 205 bp overlap
ChIP endothelial cell ENCFF663LIE 372 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 138 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 184 bp overlap
ChIP fibroblast_LUNG ENCSR000DPM.CTCF.fibroblast_LUNG 156 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 132 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 329 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 372 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 186 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 106 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 115 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 126 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 187 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 195 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 176 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 230 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 149 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 278 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 199 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 247 bp overlap
ChIP leukemia_CEBPA-168h GSE142161.CTCF.leukemia_CEBPA-168h 177 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 259 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 213 bp overlap
ChIP nephron ENCFF411ACD 275 bp overlap
ChIP nephron ENCFF411ACD 372 bp overlap
ChIP neural progenitor cell ENCFF420RBO 178 bp overlap
ChIP neural progenitor cell ENCFF581WPG 307 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 236 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 96 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 161 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 175 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 184 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 213 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 216 bp overlap
ChIP smooth muscle cell ENCFF656FBT 258 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 229 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 133 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 341 bp overlap
DRGX 1 dataset
Motif DE_12h DE_12h-DRGX_MA1481.2 6 bp overlap
ELK1::HOXB13 1 dataset
Motif DE_12h DE_12h-ELK1HOXB13_MA1932.2 15 bp overlap
EMX1 1 dataset
Motif DE_12h DE_12h-EMX1_MA0612.3 6 bp overlap
EMX2 1 dataset
Motif DE_12h DE_12h-EMX2_MA0886.2 6 bp overlap
EN1 1 dataset
Motif DE_12h DE_12h-EN1_MA0027.3 6 bp overlap
ERF::HOXB13 1 dataset
Motif DE_12h DE_12h-ERFHOXB13_MA1937.2 13 bp overlap
ESR1 1 dataset
ChIP MCF-7_LTED GSE86538.ESR1.MCF-7_LTED 185 bp overlap
ETV2 1 dataset
Motif DE_12h DE_12h-ETV2_MA0762.2 9 bp overlap
ETV2::DRGX 1 dataset
Motif DE_12h DE_12h-ETV2DRGX_MA1940.2 12 bp overlap
EVX1 1 dataset
Motif DE_12h DE_12h-EVX1_MA0887.2 6 bp overlap
EVX2 1 dataset
Motif DE_12h DE_12h-EVX2_MA0888.2 6 bp overlap
FLI1::DRGX 1 dataset
Motif DE_12h DE_12h-FLI1DRGX_MA1949.2 14 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 176 bp overlap
GSX1 1 dataset
Motif DE_12h DE_12h-GSX1_MA0892.2 6 bp overlap
GSX2 1 dataset
Motif DE_12h DE_12h-GSX2_MA0893.3 7 bp overlap
HOXA1 1 dataset
Motif DE_12h DE_12h-HOXA1_MA1495.2 6 bp overlap
HOXA2 1 dataset
Motif DE_12h DE_12h-HOXA2_MA0900.3 6 bp overlap
HOXA3 1 dataset
Motif DE_12h DE_12h-HOXA3_MA2119.1 7 bp overlap
HOXA6 1 dataset
Motif DE_12h DE_12h-HOXA6_MA1497.2 7 bp overlap
HOXB1 1 dataset
Motif DE_12h DE_12h-HOXB1_MA2093.1 7 bp overlap
HOXB2 1 dataset
Motif DE_12h DE_12h-HOXB2_MA0902.3 6 bp overlap
HOXB3 1 dataset
Motif DE_12h DE_12h-HOXB3_MA0903.2 6 bp overlap
HOXB5 1 dataset
Motif DE_12h DE_12h-HOXB5_MA0904.3 6 bp overlap
HOXB6 1 dataset
Motif DE_12h DE_12h-HOXB6_MA1500.2 7 bp overlap
HOXB7 1 dataset
Motif DE_12h DE_12h-HOXB7_MA1501.2 7 bp overlap
HOXB8 1 dataset
Motif DE_12h DE_12h-HOXB8_MA1502.2 7 bp overlap
HOXC8 1 dataset
Motif DE_12h DE_12h-HOXC8_MA1505.2 6 bp overlap
HOXD12::ELK1 1 dataset
Motif DE_12h DE_12h-HOXD12ELK1_MA1958.2 13 bp overlap
HOXD8 1 dataset
Motif DE_12h DE_12h-HOXD8_MA0910.3 7 bp overlap
Hand1 1 dataset
Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap
ISX 1 dataset
Motif DE_12h DE_12h-ISX_MA0654.2 6 bp overlap
LHX5 1 dataset
Motif DE_12h DE_12h-LHX5_MA1519.2 7 bp overlap
Lhx4 1 dataset
Motif DE_12h DE_12h-Lhx4_MA0704.2 6 bp overlap
Lhx8 1 dataset
Motif DE_12h DE_12h-Lhx8_MA0705.2 6 bp overlap
MEOX1 1 dataset
Motif DE_12h DE_12h-MEOX1_MA0661.2 7 bp overlap
MEOX2 1 dataset
Motif DE_12h DE_12h-MEOX2_MA0706.2 7 bp overlap
MIXL1 1 dataset
Motif DE_12h DE_12h-MIXL1_MA0662.2 6 bp overlap
MNX1 1 dataset
Motif DE_12h DE_12h-MNX1_MA0707.3 6 bp overlap
NKX6-2 1 dataset
Motif DE_12h DE_12h-NKX6-2_MA0675.2 6 bp overlap
NR1I3 1 dataset
Motif DE_12h DE_12h-NR1I3_MA1534.2 8 bp overlap
NR2C1 1 dataset
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
NR2F2 1 dataset
Motif DE_12h DE_12h-NR2F2_MA1111.2 7 bp overlap
NR4A2 1 dataset
Motif DE_12h DE_12h-NR4A2_MA0160.3 8 bp overlap
Nr1H2 1 dataset
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
PDX1 1 dataset
Motif DE_12h DE_12h-PDX1_MA0132.3 6 bp overlap
POU6F1 1 dataset
Motif DE_12h DE_12h-POU6F1_MA0628.2 6 bp overlap
PRRX1 1 dataset
Motif DE_12h DE_12h-PRRX1_MA0716.2 6 bp overlap
Ppara 1 dataset
Motif DE_12h DE_12h-Ppara_MA2338.1 7 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 218 bp overlap
ChIP H1 ENCFF967OJF 229 bp overlap
RARA 1 dataset
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
RAX2 1 dataset
Motif DE_12h DE_12h-RAX2_MA0717.2 6 bp overlap
RORA 1 dataset
Motif DE_12h DE_12h-RORA_MA0071.1 10 bp overlap
Rarg 1 dataset
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
SHOX 1 dataset
Motif DE_12h DE_12h-SHOX_MA0630.2 6 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
SMC1 1 dataset
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.SMC1.HAP1_WaplKO-33_SCC4KO 221 bp overlap
SMC3 1 dataset
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 212 bp overlap
STAG1 1 dataset
ChIP OCI-AML-3_deltaSTAG2 GSE111537.STAG1.OCI-AML-3_deltaSTAG2 129 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 107 bp overlap
Shox2 1 dataset
Motif DE_12h DE_12h-Shox2_MA0720.2 6 bp overlap
Spi1 1 dataset
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
TFAP2A 1 dataset
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
TFAP2B 1 dataset
Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap
TFAP2C 1 dataset
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
TFAP2E 1 dataset
Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap
TLX2 1 dataset
Motif DE_12h DE_12h-TLX2_MA1577.2 6 bp overlap
UNCX 1 dataset
Motif DE_12h DE_12h-UNCX_MA0721.2 6 bp overlap
VAX2 1 dataset
Motif DE_12h DE_12h-VAX2_MA0723.3 6 bp overlap
Vdr 1 dataset
Motif DE_12h DE_12h-Vdr_MA0693.4 7 bp overlap
ZNF143 1 dataset
ChIP WA01 ENCSR000EBW.ZNF143.WA01 121 bp overlap
ZNF35 1 dataset
Motif DE_12h DE_12h-ZNF35_MA2333.1 7 bp overlap
ZNF652 1 dataset
Motif DE_12h DE_12h-ZNF652_MA1657.2 9 bp overlap
ZSCAN16 1 dataset
Motif DE_12h DE_12h-ZSCAN16_MA2100.1 18 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
mix-a 1 dataset
Motif DE_12h DE_12h-mix-a_MA0621.2 7 bp overlap
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