Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

40 transcription factors

AFF1 2 datasets

ChIP K-562 ENCSR241LIH.AFF1.K-562 159 bp overlap

ChIP K562 ENCFF096RYC 146 bp overlap

BCL6 2 datasets

ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 655 bp overlap

ChIP OCI-Ly1_UV GSE103125.BCL6.OCI-Ly1_UV 352 bp overlap

BRD4 2 datasets

ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 509 bp overlap

ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 266 bp overlap

CBX1 1 dataset

ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 174 bp overlap

CRX 3 datasets

ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 237 bp overlap

ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 286 bp overlap

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 389 bp overlap

CTCF 22 datasets

ChIP A-673 ENCSR611JJS.CTCF.A-673 251 bp overlap

ChIP BE2C ENCFF757SRF 309 bp overlap

ChIP BE2C ENCSR000DQD.CTCF.BE2C 198 bp overlap

ChIP GM23338 ENCFF772DML 201 bp overlap

ChIP H1 ENCFF414GZI 217 bp overlap

ChIP K-562 ENCSR000EGM.CTCF.K-562 137 bp overlap

ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 414 bp overlap

ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 330 bp overlap

ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 173 bp overlap

ChIP K562 ENCFF598YSU 271 bp overlap

ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 116 bp overlap

ChIP MCF-7 ENCFF414SZG 191 bp overlap

ChIP U-937 ERP008568.CTCF.U-937 361 bp overlap

ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 165 bp overlap

ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap

ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 162 bp overlap

ChIP brain ENCFF099ASU 423 bp overlap

ChIP endodermal cell ENCFF471YCZ 415 bp overlap

ChIP islet ERP004003.CTCF.islet 170 bp overlap

ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 253 bp overlap

ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 318 bp overlap

ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 412 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF262VBH 108 bp overlap

ChIP BLaER1 ENCFF364PUR 50 bp overlap

E2F6 1 dataset

ChIP WA01 ENCSR000BSI.E2F6.WA01 119 bp overlap

EOMES 2 datasets

ChIP hESC GSE26097.EOMES.hESC 251 bp overlap

ChIP hESC GSE26097.EOMES.hESC 276 bp overlap

ESR1 2 datasets

ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 291 bp overlap

ChIP MCF-7_Veh GSE93510.ESR1.MCF-7_Veh 301 bp overlap

FEZF1 1 dataset

ChIP HEK293 GSE76494.FEZF1.HEK293 261 bp overlap

FOXA1 1 dataset

ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 285 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 639 bp overlap

ChIP DE DE-FOXA2-2 527 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 724 bp overlap

ChIP DE DE-GATA4-2 638 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 274 bp overlap

GATA6 10 datasets

ChIP DE DE-GATA6-1 648 bp overlap

ChIP DE DE-GATA6-2 644 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 293 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 445 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 422 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 642 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 608 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 420 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 753 bp overlap

ChIP foregut GSE117136.GATA6.foregut 486 bp overlap

HLF 2 datasets

ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 161 bp overlap

ChIP HepG2 ENCFF854JLR 245 bp overlap

JARID2 1 dataset

ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 277 bp overlap

JMJD1C 1 dataset

ChIP HL-60 GSE63484.JMJD1C.HL-60 72 bp overlap

MAX 1 dataset

ChIP K-562 ENCSR000EFV.MAX.K-562 106 bp overlap

MTA3 1 dataset

ChIP K-562 ENCSR180NCY.MTA3.K-562 511 bp overlap

NELFE 1 dataset

ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 255 bp overlap

NEUROD1 1 dataset

ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 310 bp overlap

NR4A1 1 dataset

ChIP K562 ENCFF679FCN 311 bp overlap

NRL 1 dataset

ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 287 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 350 bp overlap

PAX3-FOXO1 1 dataset

ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 237 bp overlap

RAD21 1 dataset

ChIP RH4 GSE83726.RAD21.RH4 164 bp overlap

RORB 1 dataset

ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 287 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 714 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 305 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 346 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 695 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 595 bp overlap

SMC3 1 dataset

ChIP peripheral-blood-neutrophil_Ecoli-1 GSE126755.SMC3.peripheral-blood-neutrophil_Ecoli-1 294 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 283 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 585 bp overlap

SOX2 1 dataset

ChIP RENVM GSE49404.SOX2.RENVM 236 bp overlap

SREBP2 1 dataset

ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 176 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 187 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 203 bp overlap

TP63 1 dataset

ChIP breast-organoid GSE113909.TP63.breast-organoid 116 bp overlap

YY1 1 dataset

ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 104 bp overlap

ZBTB24 1 dataset

ChIP HCT-116 GSE111683.ZBTB24.HCT-116 415 bp overlap

ZNF35 1 dataset

ChIP HEK293 GSE76494.ZNF35.HEK293 198 bp overlap

Gene	Dist. to TSS	Distance	Link type
RBM28	108.3 kb	Distal	Multiome
IMPDH1	174.5 kb	Distal	Multiome
HILPDA	220.3 kb	Distal	Multiome
METTL2B	241.2 kb	Distal	Multiome
LINC03072	295.5 kb	Distal	Multiome

Genome Browser