chr7 : 33,351,729 33,352,113
384 bp 45 TFs 1 linked gene
This 384 bp open chromatin element is linked to BBS9 and is bound by 45 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
BBS9 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:33,346,729 – 33,357,113
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
45 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 161 bp overlap
BRD4 2 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 320 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CHD1 2 datasets
ChIP H1 ENCFF998XEK 222 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 119 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 284 bp overlap
ESR1 2 datasets
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 167 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 286 bp overlap
FOXA1 2 datasets
ChIP MCF-7_shNR2F2 GSE132432.FOXA1.MCF-7_shNR2F2 384 bp overlap
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 199 bp overlap
HIC2 2 datasets
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
Motif ES_0h ES_0h-HIC2_MA0738.2 6 bp overlap
Hmx2 2 datasets
Motif DE_12h DE_12h-Hmx2_MA0897.2 15 bp overlap
Motif ES_0h ES_0h-Hmx2_MA0897.2 15 bp overlap
ISL2 2 datasets
Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap
Motif ES_0h ES_0h-ISL2_MA0914.2 6 bp overlap
KLF1 2 datasets
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
Motif ES_0h ES_0h-KLF1_MA0493.3 8 bp overlap
KLF10 2 datasets
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
Motif ES_0h ES_0h-KLF10_MA1511.2 9 bp overlap
KLF14 2 datasets
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
Motif ES_0h ES_0h-KLF14_MA0740.2 9 bp overlap
KLF2 2 datasets
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
Motif ES_0h ES_0h-KLF2_MA1515.2 8 bp overlap
KLF4 2 datasets
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
Motif ES_0h ES_0h-KLF4_MA0039.5 8 bp overlap
KLF5 2 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS_E2 GSE60270.MED1.MCF-7_SHRARS_E2 199 bp overlap
NANOG 2 datasets
ChIP WA01 ERP004238.NANOG.WA01 184 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 384 bp overlap
NFYB 1 dataset
Motif DE_12h DE_12h-NFYB_MA0502.3 9 bp overlap
Nkx3-2 2 datasets
Motif DE_12h DE_12h-Nkx3-2_MA0122.4 10 bp overlap
Motif ES_0h ES_0h-Nkx3-2_MA0122.4 10 bp overlap
PATZ1 2 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif ES_0h ES_0h-PATZ1_MA1961.2 11 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 199 bp overlap
POLR2A 4 datasets
ChIP GM23338 ENCFF450WCS 242 bp overlap
ChIP H1 ENCFF566JSR 303 bp overlap
ChIP H1 ENCFF770YBQ 353 bp overlap
ChIP H1 ENCFF833NJP 336 bp overlap
POU5F1 2 datasets
ChIP SKM-1 GSE93706.POU5F1.SKM-1 154 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 219 bp overlap
Plagl1 2 datasets
Motif DE_12h DE_12h-Plagl1_MA1615.2 8 bp overlap
Motif ES_0h ES_0h-Plagl1_MA1615.2 8 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D53 GSE139377.RELA.aortic-endothelial-cell_IL1B_D53 140 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 201 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 337 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SPI1 1 dataset
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 105 bp overlap
Stat6 1 dataset
Motif DE_12h DE_12h-Stat6_MA0520.2 10 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 225 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 384 bp overlap
TAF7 2 datasets
ChIP H1 ENCFF061XZZ 267 bp overlap
ChIP WA01 ENCSR000BLU.TAF7.WA01 146 bp overlap
TBP 6 datasets
ChIP H1 ENCFF859IIO 331 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 293 bp overlap
ChIP hESC GSE122298.TBP.hESC 384 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 374 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 384 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 340 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 125 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 86 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 127 bp overlap
TP53 47 datasets
ChIP BC-3_NUT ERP014035.TP53.BC-3_NUT 145 bp overlap
ChIP GM00011 GSE55727.TP53.GM00011 364 bp overlap
ChIP GM06170 GSE55727.TP53.GM06170 360 bp overlap
ChIP H9 GSE39912.TP53.H9 372 bp overlap
ChIP H9_IFI16 GSE142050.TP53.H9_IFI16 384 bp overlap
ChIP H9_ectoderm_IFI16 GSE142050.TP53.H9_ectoderm_IFI16 384 bp overlap
ChIP H9_mesoderm_IFI16 GSE142050.TP53.H9_mesoderm_IFI16 370 bp overlap
ChIP HCT-116 GSE58506.TP53.HCT-116 200 bp overlap
ChIP HCT-116_2h_4GY GSE100292.TP53.HCT-116_2h_4GY 269 bp overlap
ChIP HCT-116_5FU GSE125927.TP53.HCT-116_5FU 271 bp overlap
ChIP HCT-116_5FU GSE58506.TP53.HCT-116_5FU 321 bp overlap
ChIP HCT-116_5FU-SC GSE125927.TP53.HCT-116_5FU-SC 317 bp overlap
ChIP HCT-116_DMSO_KOATF3 GSE74355.TP53.HCT-116_DMSO_KOATF3 369 bp overlap
ChIP HCT-116_Negative-ctrl GSE113338.TP53.HCT-116_Negative-ctrl 325 bp overlap
ChIP HCT-116_Nutlin3a GSE125927.TP53.HCT-116_Nutlin3a 381 bp overlap
ChIP HCT-116_Nutlin3a-SC GSE125927.TP53.HCT-116_Nutlin3a-SC 337 bp overlap
ChIP HCT-116_nutlin GSE86164.TP53.HCT-116_nutlin 384 bp overlap
ChIP HCT-116_si-iASSP GSE113338.TP53.HCT-116_si-iASSP 384 bp overlap
ChIP HCT-116_siGLIS2-1-5FU GSE125927.TP53.HCT-116_siGLIS2-1-5FU 384 bp overlap
ChIP HCT-116_siGLIS2-1-DMSO GSE125927.TP53.HCT-116_siGLIS2-1-DMSO 295 bp overlap
ChIP IMR-90 GSE115940.TP53.IMR-90 175 bp overlap
ChIP IMR-90_NUT3A GSE58740.TP53.IMR-90_NUT3A 287 bp overlap
ChIP K-562_DMSO GSE131484.TP53.K-562_DMSO 384 bp overlap
ChIP K-562_Daunorubicin GSE131484.TP53.K-562_Daunorubicin 339 bp overlap
ChIP K-562_Y220C_Daunorubicin GSE131484.TP53.K-562_Y220C_Daunorubicin 359 bp overlap
ChIP MCF-10A_Nutlin3A GSE111009.TP53.MCF-10A_Nutlin3A 384 bp overlap
ChIP MCF-7_1h_IR_10Gy GSE100099.TP53.MCF-7_1h_IR_10Gy 303 bp overlap
ChIP MCF-7_2-5h_IR_10Gy GSE100099.TP53.MCF-7_2-5h_IR_10Gy 379 bp overlap
ChIP MCF-7_4h_IR_10Gy GSE100099.TP53.MCF-7_4h_IR_10Gy 384 bp overlap
ChIP MCF-7_7-5h_IR_10Gy GSE100099.TP53.MCF-7_7-5h_IR_10Gy 384 bp overlap
ChIP MCF-7_7-5h_IR_10Gy_Nutlin GSE100099.TP53.MCF-7_7-5h_IR_10Gy_Nutlin 384 bp overlap
ChIP MCF-7_NCS-treated GSE101737.TP53.MCF-7_NCS-treated 305 bp overlap
ChIP MCF-7_minus_Decitabine GSE100292.TP53.MCF-7_minus_Decitabine 192 bp overlap
ChIP MCF-7_nutlin GSE86164.TP53.MCF-7_nutlin 384 bp overlap
ChIP MCF-7_nutlin_2h GSE100292.TP53.MCF-7_nutlin_2h 155 bp overlap
ChIP MCF-7_plus_Decitabine GSE100292.TP53.MCF-7_plus_Decitabine 384 bp overlap
ChIP SJSA-1 GSE86164.TP53.SJSA-1 260 bp overlap
ChIP SJSA-1_nutlin GSE86164.TP53.SJSA-1_nutlin 373 bp overlap
ChIP SaOS-2 GSE15780.TP53.SaOS-2 251 bp overlap
ChIP U2OS_DXR GSE46641.TP53.U2OS_DXR 245 bp overlap
ChIP U2OS_NUT GSE46641.TP53.U2OS_NUT 306 bp overlap
ChIP U2OS_UV_16H ERP004176.TP53.U2OS_UV_16H 181 bp overlap
ChIP WTC11 ENCFF359JCU 384 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 375 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 384 bp overlap
ChIP keratinocyte_ADRIA GSE56674.TP53.keratinocyte_ADRIA 312 bp overlap
ChIP keratinocyte_CISP GSE56674.TP53.keratinocyte_CISP 309 bp overlap
TP63 5 datasets
ChIP BxPC-3 GSE115461.TP63.BxPC-3 281 bp overlap
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 254 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 200 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 182 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 172 bp overlap
ZNF143 1 dataset
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 301 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
ZNF558 1 dataset
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
ZNF582 2 datasets
Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap
Motif ES_0h ES_0h-ZNF582_MA1983.2 19 bp overlap
ZNF680 2 datasets
ChIP HEK293 ENCFF418WHE 208 bp overlap
ChIP HEK293 ENCSR307CKC.ZNF680.HEK293 140 bp overlap
ZNF740 2 datasets
Motif DE_12h DE_12h-ZNF740_MA0753.3 10 bp overlap
Motif ES_0h ES_0h-ZNF740_MA0753.3 10 bp overlap
ZNF816 2 datasets
Motif DE_12h DE_12h-ZNF816_MA1719.2 15 bp overlap
Motif ES_0h ES_0h-ZNF816_MA1719.2 15 bp overlap