Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

57 transcription factors

ARID1A 1 dataset

ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 323 bp overlap

BAF155 1 dataset

ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 180 bp overlap

CHD4 1 dataset

ChIP 501-mel GSE134848.CHD4.501-mel 274 bp overlap

CTCF 1 dataset

ChIP neural cell ENCFF335ADI 386 bp overlap

CTNNB1 1 dataset

ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 239 bp overlap

DUX4 1 dataset

ChIP WA01 GSE94322.DUX4.WA01 76 bp overlap

EHF 1 dataset

Motif DE_60h DE_60h-EHF_MA0598.4 9 bp overlap

ELF1 1 dataset

Motif DE_60h DE_60h-ELF1_MA0473.4 9 bp overlap

ELF3 1 dataset

Motif DE_60h DE_60h-ELF3_MA0640.3 9 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 285 bp overlap

EP300 3 datasets

ChIP neural ENCSR843ZUP.EP300.neural 445 bp overlap

ChIP neural cell ENCFF442QNK 302 bp overlap

ChIP neural cell ENCFF442QNK 379 bp overlap

ERF::FOXI1 1 dataset

Motif DE_60h DE_60h-ERFFOXI1_MA1935.2 10 bp overlap

ERG 1 dataset

ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 74 bp overlap

ESR1 1 dataset

ChIP MCF-7 GSE128445.ESR1.MCF-7 129 bp overlap

ETV1 1 dataset

Motif DE_60h DE_60h-ETV1_MA0761.3 9 bp overlap

ETV2::FOXI1 1 dataset

Motif DE_60h DE_60h-ETV2FOXI1_MA1942.2 11 bp overlap

Erg 1 dataset

Motif DE_60h DE_60h-Erg_MA0474.4 10 bp overlap

FOXA1 1 dataset

ChIP MCF-7 ERP001226.FOXA1.MCF-7 100 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 445 bp overlap

ChIP DE DE-FOXA2-2 445 bp overlap

FOXJ2::ELF1 1 dataset

Motif DE_60h DE_60h-FOXJ2ELF1_MA1952.2 11 bp overlap

FOXO1::ELF1 1 dataset

Motif DE_60h DE_60h-FOXO1ELF1_MA1953.2 13 bp overlap

FOXO1::ELK1 1 dataset

Motif DE_60h DE_60h-FOXO1ELK1_MA1954.2 13 bp overlap

FOXO1::ELK3 1 dataset

Motif DE_60h DE_60h-FOXO1ELK3_MA1955.2 13 bp overlap

GABPA 1 dataset

Motif DE_60h DE_60h-GABPA_MA0062.4 10 bp overlap

GATA2 1 dataset

ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 80 bp overlap

GATA3 5 datasets

ChIP MCF-7 GSE133072.GATA3.MCF-7 163 bp overlap

ChIP MCF-7 GSE122847.GATA3.MCF-7 154 bp overlap

ChIP MCF-7_E2 GSE40129.GATA3.MCF-7_E2 110 bp overlap

ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 93 bp overlap

ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 154 bp overlap

GATA4 5 datasets

ChIP DE DE-GATA4-1 445 bp overlap

ChIP DE DE-GATA4-2 445 bp overlap

ChIP Hep-G2 GSE135714.GATA4.Hep-G2 445 bp overlap

ChIP foregut GSE117136.GATA4.foregut 341 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 445 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 445 bp overlap

ChIP DE DE-GATA6-2 445 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 405 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 396 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 404 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 445 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 445 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 445 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 445 bp overlap

IKZF1 1 dataset

Motif DE_60h DE_60h-IKZF1_MA1508.2 8 bp overlap

IKZF2 1 dataset

Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap

Ikzf3 1 dataset

Motif DE_60h DE_60h-Ikzf3_MA1992.2 9 bp overlap

MSC 1 dataset

Motif DE_60h DE_60h-MSC_MA0665.1 10 bp overlap

NANOG 3 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 349 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 285 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 298 bp overlap

OSR2 1 dataset

ChIP HEK293 ENCSR324LTM.OSR2.HEK293 205 bp overlap

PHIP 2 datasets

ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 311 bp overlap

ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 72 bp overlap

POLR2A 1 dataset

ChIP neural cell ENCFF604SPB 282 bp overlap

PRDM10 1 dataset

ChIP HEK293 ENCFF145WQQ 271 bp overlap

RAD21 1 dataset

ChIP neural ENCSR198ZYJ.RAD21.neural 305 bp overlap

REST 2 datasets

ChIP neural ENCSR000BTV.REST.neural 384 bp overlap

ChIP neural cell ENCFF882LXX 290 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 445 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 342 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 318 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 317 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 246 bp overlap

SMARCA4 1 dataset

ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 445 bp overlap

SMC3 1 dataset

ChIP neural cell ENCFF795YGY 315 bp overlap

TCF7L2 2 datasets

Motif DE_60h DE_60h-TCF7L2_MA0523.2 9 bp overlap

ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 274 bp overlap

TRPS1 1 dataset

ChIP MCF-7 GSE133072.TRPS1.MCF-7 116 bp overlap

YY1 2 datasets

ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 290 bp overlap

ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 104 bp overlap

Yy1 1 dataset

Motif DE_60h DE_60h-Yy1_MA0095.4 8 bp overlap

ZFP42 2 datasets

Motif DE_60h DE_60h-ZFP42_MA1651.2 13 bp overlap

ChIP HEK293 GSE76494.ZFP42.HEK293 188 bp overlap

ZIC2 1 dataset

ChIP HEK293 ENCFF033NQQ 302 bp overlap

ZNF175 1 dataset

Motif DE_60h DE_60h-ZNF175_MA2332.1 9 bp overlap

ZNF189 1 dataset

ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 225 bp overlap

ZNF2 2 datasets

ChIP HEK293 ENCFF641ICT 138 bp overlap

ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 327 bp overlap

ZNF283 1 dataset

ChIP HEK293T GSE78099.ZNF283.HEK293T 157 bp overlap

ZNF341 1 dataset

ChIP HEK293 GSE76494.ZNF341.HEK293 248 bp overlap

Zic1::Zic2 1 dataset

Motif DE_60h DE_60h-Zic1Zic2_MA1628.2 7 bp overlap

Zic2 1 dataset

Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap

Zic3 1 dataset

Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap

Genome Browser