chr6 : 111,949,433 – 111,949,936
503 bp 70 TFs 0 linked genes
This 503 bp open chromatin element has no linked target genes and is bound by 70 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:111,944,433 – 111,954,936
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
70 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 144 bp overlap
BARX1 2 datasets
Motif DE_36h DE_36h-BARX1_MA0875.2 6 bp overlap
Motif DE_48h DE_48h-BARX1_MA0875.2 6 bp overlap
BSX 2 datasets
Motif DE_36h DE_36h-BSX_MA0876.2 6 bp overlap
Motif DE_48h DE_48h-BSX_MA0876.2 6 bp overlap
CTCF 36 datasets
ChIP D54 ENCSR000DKN.CTCF.D54 123 bp overlap
ChIP FT282 GSE131931.CTCF.FT282 187 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 196 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP HCT-116 ENCSR000BSE.CTCF.HCT-116 127 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 143 bp overlap
ChIP HEK293 ENCSR617IFZ.CTCF.HEK293 248 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 153 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 153 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 240 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 165 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP IMR-90 ENCSR000EFI.CTCF.IMR-90 169 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 120 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 167 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 359 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 460 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 292 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 138 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 357 bp overlap
ChIP MCF-7 ENCFF198DQX 231 bp overlap
ChIP MCF-7 ENCFF494VXA 231 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 130 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 177 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 125 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 172 bp overlap
ChIP endodermal cell ENCFF471YCZ 122 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 183 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 202 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 122 bp overlap
ChIP foreskin fibroblast ENCFF219EBQ 325 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 127 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 170 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 232 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 215 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 218 bp overlap
CTCF_s 1 dataset
ChIP HeLa-S3_biotin GSE108869.CTCF_s.HeLa-S3_biotin 169 bp overlap
DLX1 2 datasets
Motif DE_36h DE_36h-DLX1_MA0879.3 6 bp overlap
Motif DE_48h DE_48h-DLX1_MA0879.3 6 bp overlap
DLX6 2 datasets
Motif DE_36h DE_36h-DLX6_MA0882.2 6 bp overlap
Motif DE_48h DE_48h-DLX6_MA0882.2 6 bp overlap
Dlx2 2 datasets
Motif DE_36h DE_36h-Dlx2_MA0885.3 8 bp overlap
Motif DE_48h DE_48h-Dlx2_MA0885.3 8 bp overlap
Dlx3 2 datasets
Motif DE_36h DE_36h-Dlx3_MA0880.2 6 bp overlap
Motif DE_48h DE_48h-Dlx3_MA0880.2 6 bp overlap
Dlx4 2 datasets
Motif DE_36h DE_36h-Dlx4_MA0881.2 6 bp overlap
Motif DE_48h DE_48h-Dlx4_MA0881.2 6 bp overlap
Dlx5 2 datasets
Motif DE_36h DE_36h-Dlx5_MA1476.3 8 bp overlap
Motif DE_48h DE_48h-Dlx5_MA1476.3 8 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 233 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 503 bp overlap
ChIP DE DE-FOXA2-2 503 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 503 bp overlap
ChIP DE DE-GATA4-2 503 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 503 bp overlap
ChIP DE DE-GATA6-2 503 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 382 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 376 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 298 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 430 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 404 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 373 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 503 bp overlap
GBX2 2 datasets
Motif DE_36h DE_36h-GBX2_MA0890.2 6 bp overlap
Motif DE_48h DE_48h-GBX2_MA0890.2 6 bp overlap
HESX1 2 datasets
Motif DE_36h DE_36h-HESX1_MA0894.2 6 bp overlap
Motif DE_48h DE_48h-HESX1_MA0894.2 6 bp overlap
HNRNPK 2 datasets
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 51 bp overlap
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 51 bp overlap
HOXA6 2 datasets
Motif DE_36h DE_36h-HOXA6_MA1497.2 7 bp overlap
Motif DE_48h DE_48h-HOXA6_MA1497.2 7 bp overlap
HOXA7 2 datasets
Motif DE_36h DE_36h-HOXA7_MA1498.3 6 bp overlap
Motif DE_48h DE_48h-HOXA7_MA1498.3 6 bp overlap
HOXB6 2 datasets
Motif DE_36h DE_36h-HOXB6_MA1500.2 7 bp overlap
Motif DE_48h DE_48h-HOXB6_MA1500.2 7 bp overlap
HOXB7 2 datasets
Motif DE_36h DE_36h-HOXB7_MA1501.2 7 bp overlap
Motif DE_48h DE_48h-HOXB7_MA1501.2 7 bp overlap
HOXB8 2 datasets
Motif DE_36h DE_36h-HOXB8_MA1502.2 7 bp overlap
Motif DE_48h DE_48h-HOXB8_MA1502.2 7 bp overlap
HOXD8 2 datasets
Motif DE_36h DE_36h-HOXD8_MA0910.3 7 bp overlap
Motif DE_48h DE_48h-HOXD8_MA0910.3 7 bp overlap
LBX2 2 datasets
Motif DE_36h DE_36h-LBX2_MA0699.2 6 bp overlap
Motif DE_48h DE_48h-LBX2_MA0699.2 6 bp overlap
LHX2 2 datasets
Motif DE_36h DE_36h-LHX2_MA0700.3 6 bp overlap
Motif DE_48h DE_48h-LHX2_MA0700.3 6 bp overlap
MAX 1 dataset
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 213 bp overlap
MED1 1 dataset
ChIP RH4 GSE83726.MED1.RH4 225 bp overlap
MSX1 2 datasets
Motif DE_36h DE_36h-MSX1_MA0666.3 6 bp overlap
Motif DE_48h DE_48h-MSX1_MA0666.3 6 bp overlap
MSX2 2 datasets
Motif DE_36h DE_36h-MSX2_MA0708.3 6 bp overlap
Motif DE_48h DE_48h-MSX2_MA0708.3 6 bp overlap
MYCN 2 datasets
ChIP RH4 GSE83726.MYCN.RH4 215 bp overlap
ChIP SH-EP_MYCNER_plusOHT GSE111905.MYCN.SH-EP_MYCNER_plusOHT 130 bp overlap
MYOG 2 datasets
ChIP RH4 GSE83726.MYOG.RH4 346 bp overlap
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 130 bp overlap
Msx3 2 datasets
Motif DE_36h DE_36h-Msx3_MA0709.2 6 bp overlap
Motif DE_48h DE_48h-Msx3_MA0709.2 6 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 293 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 147 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 312 bp overlap
Nobox 2 datasets
Motif DE_36h DE_36h-Nobox_MA0125.2 6 bp overlap
Motif DE_48h DE_48h-Nobox_MA0125.2 6 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 199 bp overlap
PCBP2 3 datasets
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 58 bp overlap
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 58 bp overlap
ChIP HepG2 ENCFF033VWK 97 bp overlap
POU2F1::SOX2 2 datasets
Motif DE_36h DE_36h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif DE_48h DE_48h-POU2F1SOX2_MA1962.1 17 bp overlap
Pou5f1::Sox2 2 datasets
Motif DE_36h DE_36h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif DE_48h DE_48h-Pou5f1Sox2_MA0142.1 15 bp overlap
RAD21 6 datasets
ChIP H1 ENCFF967OJF 245 bp overlap
ChIP HepG2 ENCFF906QIS 225 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 100 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 228 bp overlap
ChIP K562 ENCFF634XYR 365 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 192 bp overlap
RAX 2 datasets
Motif DE_36h DE_36h-RAX_MA0718.2 6 bp overlap
Motif DE_48h DE_48h-RAX_MA0718.2 6 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 60 bp overlap
RUNX3 1 dataset
Motif DE_48h DE_48h-RUNX3_MA0684.3 8 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 403 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 297 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 479 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 465 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 84 bp overlap
SOX13 2 datasets
Motif DE_36h DE_36h-SOX13_MA1120.2 7 bp overlap
Motif DE_48h DE_48h-SOX13_MA1120.2 7 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 254 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 452 bp overlap
SOX2 3 datasets
Motif DE_36h DE_36h-SOX2_MA0143.5 7 bp overlap
Motif DE_48h DE_48h-SOX2_MA0143.5 7 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 186 bp overlap
STAT1 2 datasets
Motif DE_36h DE_36h-STAT1_MA0137.4 9 bp overlap
Motif DE_48h DE_48h-STAT1_MA0137.4 9 bp overlap
Sox17 2 datasets
Motif DE_36h DE_36h-Sox17_MA0078.3 10 bp overlap
Motif DE_48h DE_48h-Sox17_MA0078.3 10 bp overlap
Sox3 2 datasets
Motif DE_36h DE_36h-Sox3_MA0514.3 7 bp overlap
Motif DE_48h DE_48h-Sox3_MA0514.3 7 bp overlap
Sox5 2 datasets
Motif DE_36h DE_36h-Sox5_MA0087.3 8 bp overlap
Motif DE_48h DE_48h-Sox5_MA0087.3 8 bp overlap
Sox6 2 datasets
Motif DE_36h DE_36h-Sox6_MA0515.1 10 bp overlap
Motif DE_48h DE_48h-Sox6_MA0515.1 10 bp overlap
Sox7 2 datasets
Motif DE_36h DE_36h-Sox7_MA2095.1 10 bp overlap
Motif DE_48h DE_48h-Sox7_MA2095.1 10 bp overlap
Stat4 2 datasets
Motif DE_36h DE_36h-Stat4_MA0518.2 10 bp overlap
Motif DE_48h DE_48h-Stat4_MA0518.2 10 bp overlap
TP53 1 dataset
ChIP IMR-90 GSE42728.TP53.IMR-90 115 bp overlap
YY1 3 datasets
ChIP H1 ENCFF524BTL 337 bp overlap
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 149 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 312 bp overlap
YY2 1 dataset
ChIP HEK293 ENCSR692HSE.YY2.HEK293 292 bp overlap
ZBTB17 2 datasets
Motif DE_36h DE_36h-ZBTB17_MA2102.1 8 bp overlap
Motif DE_48h DE_48h-ZBTB17_MA2102.1 8 bp overlap
ZBTB20 1 dataset
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 244 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 236 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 108 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 357 bp overlap
ZNF263 1 dataset
ChIP HEK293 GSE76494.ZNF263.HEK293 121 bp overlap
ZNF35 2 datasets
Motif DE_36h DE_36h-ZNF35_MA2333.1 7 bp overlap
Motif DE_48h DE_48h-ZNF35_MA2333.1 7 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 362 bp overlap
ZSCAN18 1 dataset
ChIP WTC11 ENCFF867QWX 257 bp overlap
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