chr6 : 109,869,245 – 109,870,084
839 bp 41 TFs 2 linked genes
This 839 bp open chromatin element is linked to FIG4 and AK9 and is bound by 41 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
FIG4 178.4 kb Distal Multiome
AK9 179.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:109,864,245 – 109,875,084
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
41 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_P27 GSE130408.AR.prostate_P27 231 bp overlap
BRD4 1 dataset
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 84 bp overlap
CDK8 3 datasets
ChIP myometrium_PT1063 GSE128230.CDK8.myometrium_PT1063 92 bp overlap
ChIP myometrium_PT886 GSE128230.CDK8.myometrium_PT886 106 bp overlap
ChIP myometrium_PT916 GSE128230.CDK8.myometrium_PT916 147 bp overlap
CHD4 2 datasets
ChIP 501-mel GSE134848.CHD4.501-mel 69 bp overlap
ChIP 501-mel GSE134848.CHD4.501-mel 68 bp overlap
CTCF 7 datasets
ChIP dorsolateral prefrontal cortex ENCFF338KEP 434 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF406ZHG 385 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF458OBF 378 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF595WAL 326 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF812HQJ 444 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF841TWE 386 bp overlap
ChIP nerve_tibial ENCSR822PJT.CTCF.nerve_tibial 222 bp overlap
DPF1 1 dataset
ChIP K-562 GSE97661.DPF1.K-562 156 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 369 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 135 bp overlap
ESR1 3 datasets
ChIP MCF-7 GSE76893.ESR1.MCF-7 154 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 220 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 148 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 146 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 116 bp overlap
FOS 2 datasets
ChIP myometrium_PT886 GSE128230.FOS.myometrium_PT886 115 bp overlap
ChIP myometrium_PT967 GSE128230.FOS.myometrium_PT967 154 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 839 bp overlap
ChIP DE DE-FOXA2-2 757 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 605 bp overlap
ChIP DE DE-GATA4-2 758 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 606 bp overlap
ChIP DE DE-GATA6-2 661 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 627 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 594 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 690 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 656 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 758 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 496 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 264 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 511 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 297 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 305 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 212 bp overlap
MAX 5 datasets
ChIP H1 ENCFF914VQY 306 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 174 bp overlap
ChIP K562 ENCFF110LJS 319 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 189 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EEZ.MAX.endothelial_umbilical-vein 103 bp overlap
MED12 7 datasets
ChIP leiomyoma_PT1063 GSE128230.MED12.leiomyoma_PT1063 59 bp overlap
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 72 bp overlap
ChIP leiomyoma_PT967 GSE128230.MED12.leiomyoma_PT967 168 bp overlap
ChIP myometrium_PT1063 GSE128230.MED12.myometrium_PT1063 120 bp overlap
ChIP myometrium_PT886 GSE128230.MED12.myometrium_PT886 115 bp overlap
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 172 bp overlap
ChIP myometrium_PT967 GSE128230.MED12.myometrium_PT967 97 bp overlap
MITF 7 datasets
ChIP 501-mel GSE61965.MITF.501-mel 277 bp overlap
ChIP 501-mel GSE137522.MITF.501-mel 262 bp overlap
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 262 bp overlap
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 313 bp overlap
ChIP K-562 ENCSR797SWM.MITF.K-562 264 bp overlap
ChIP melanocyte_BRAFV600E GSE50681.MITF.melanocyte_BRAFV600E 213 bp overlap
ChIP melanocyte_CTR GSE50681.MITF.melanocyte_CTR 203 bp overlap
MYC 1 dataset
ChIP K-562 ENCSR000EGJ.MYC.K-562 112 bp overlap
MYCN 2 datasets
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 167 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.MYCN.SHEP-21N_DOX_0H 167 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 533 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017011 GSE129039.OLIG2.brain-prefrontal-cortex_2017011 312 bp overlap
PGR 1 dataset
ChIP leiomyoma_RU486 GSE40724.PGR.leiomyoma_RU486 149 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 294 bp overlap
POLR2A 1 dataset
ChIP vagina ENCFF305NWS 358 bp overlap
POU2F1 1 dataset
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 240 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 526 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 728 bp overlap
RAD51 2 datasets
ChIP K-562 ENCSR524BUE.RAD51.K-562 317 bp overlap
ChIP K562 ENCFF133ELP 305 bp overlap
REST 1 dataset
ChIP hippocampus GSE144226.REST.hippocampus 135 bp overlap
RNF2 1 dataset
ChIP HMELBRAF_OVER GSE51929.RNF2.HMELBRAF_OVER 209 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 744 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 713 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 199 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 588 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 688 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 584 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 643 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 681 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 680 bp overlap
SMARCA4 1 dataset
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 119 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 319 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 269 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 208 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 669 bp overlap
TFE3 1 dataset
ChIP K562 ENCFF697ABG 284 bp overlap
TSHZ1 1 dataset
ChIP K562 ENCFF289XHG 264 bp overlap
USF1 16 datasets
ChIP A-549 ENCSR000BHX.USF1.A-549 167 bp overlap
ChIP GM12878 ENCSR000BGI.USF1.GM12878 109 bp overlap
ChIP H1 ENCFF090WVU 156 bp overlap
ChIP HCT-116 ENCSR000BVK.USF1.HCT-116 152 bp overlap
ChIP Hep-G2 ENCSR000BGM.USF1.Hep-G2 191 bp overlap
ChIP HepG2 ENCFF201JKA 198 bp overlap
ChIP HepG2 ENCFF807KYJ 142 bp overlap
ChIP Ishikawa ENCFF728IEG 250 bp overlap
ChIP Ishikawa ENCSR000BSX.USF1.Ishikawa 168 bp overlap
ChIP K-562 ENCSR000BKT.USF1.K-562 239 bp overlap
ChIP K562 ENCFF633EZB 261 bp overlap
ChIP SK-N-SH ENCFF967PDP 285 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 212 bp overlap
ChIP SK-N-SH ENCSR000BTZ.USF1.SK-N-SH 196 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 279 bp overlap
ChIP WTC11 ENCFF699QGS 350 bp overlap
USF2 12 datasets
ChIP GM12878 GSE97661.USF2.GM12878 206 bp overlap
ChIP H1 ENCFF434EDF 277 bp overlap
ChIP HeLa-S3 ENCSR000ECW.USF2.HeLa-S3 143 bp overlap
ChIP Hep-G2 GSE97661.USF2.Hep-G2 272 bp overlap
ChIP IMR-90 ENCFF438KUN 131 bp overlap
ChIP IMR-90 ENCSR513UQG.USF2.IMR-90 208 bp overlap
ChIP K-562 ENCSR359NFW.USF2.K-562 252 bp overlap
ChIP K-562 ENCSR578KEN.USF2.K-562 178 bp overlap
ChIP K562 ENCFF306QPU 393 bp overlap
ChIP K562 ENCFF397QGU 265 bp overlap
ChIP WA01 ENCSR000ECD.USF2.WA01 133 bp overlap
ChIP WTC11 ENCFF139JAW 260 bp overlap
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