chr6 : 105,851,080 105,851,511
431 bp 42 TFs 0 linked genes
This 431 bp open chromatin element has no linked target genes and is bound by 42 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:105,846,080 – 105,856,511
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
42 transcription factors
Source
Cell type
AR 3 datasets
ChIP prostate GSE56288.AR.prostate 175 bp overlap
ChIP prostate_P27 GSE130408.AR.prostate_P27 204 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 159 bp overlap
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 272 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 248 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 305 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 278 bp overlap
CDK8 1 dataset
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 66 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 431 bp overlap
CREBBP 1 dataset
ChIP fibroblast_proliferating GSE106146.CREBBP.fibroblast_proliferating 172 bp overlap
CTCF 2 datasets
ChIP HEK293T GSE115862.CTCF.HEK293T 92 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 152 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 136 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 203 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 404 bp overlap
ChIP DE DE-FOXA2-2 342 bp overlap
GATA2 1 dataset
ChIP TF1 GSE73207.GATA2.TF1 122 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 431 bp overlap
ChIP DE DE-GATA4-2 431 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 420 bp overlap
ChIP DE DE-GATA6-2 410 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 164 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 213 bp overlap
HSF1 1 dataset
ChIP MO91 GSE45852.HSF1.MO91 176 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 297 bp overlap
ChIP K562 ENCFF348IBL 416 bp overlap
ChIP K562 ENCFF348IBL 133 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 202 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 56 bp overlap
MYOD1 2 datasets
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 184 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 205 bp overlap
NANOG 7 datasets
ChIP H1 ENCFF747ZPQ 222 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 423 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 276 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 185 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 321 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 240 bp overlap
ChIP hESC GSE20650.NANOG.hESC 188 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 178 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 359 bp overlap
NEUROG2 6 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 322 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 278 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 318 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 303 bp overlap
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 293 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 287 bp overlap
POLR2A 1 dataset
ChIP upper lobe of left lung ENCFF199JUI 314 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 169 bp overlap
RXR 1 dataset
ChIP LS180 GSE31939.RXR.LS180 112 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 103 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 190 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 431 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 327 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 137 bp overlap
SMARCA4 2 datasets
ChIP NSC GSE125033.SMARCA4.NSC 316 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 175 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 107 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 167 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 423 bp overlap
SOX4 1 dataset
ChIP MRC-5_1DPT GSE75910.SOX4.MRC-5_1DPT 192 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 322 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 183 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 203 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 250 bp overlap
TCF4 2 datasets
ChIP CAL-1 GSE76147.TCF4.CAL-1 183 bp overlap
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 276 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 233 bp overlap
ZFP57 1 dataset
ChIP hESC GSE115387.ZFP57.hESC 302 bp overlap