chr6 : 93,825,986 93,826,389
403 bp 60 TFs 0 linked genes
This 403 bp open chromatin element has no linked target genes and is bound by 60 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:93,820,986 – 93,831,389
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
AR 1 dataset
ChIP WTC11 ENCFF267GQJ 317 bp overlap
ATF2 2 datasets
ChIP H1 ENCFF295GZO 403 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 383 bp overlap
CDX2 1 dataset
Motif ES_0h ES_0h-CDX2_MA0465.3 8 bp overlap
CDX4 1 dataset
Motif ES_0h ES_0h-CDX4_MA1473.2 9 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 131 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 170 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 149 bp overlap
DMRTA1 1 dataset
Motif ES_0h ES_0h-DMRTA1_MA1707.2 10 bp overlap
DMRTA2 1 dataset
Motif ES_0h ES_0h-DMRTA2_MA1478.2 6 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 188 bp overlap
EMX1 1 dataset
ChIP WTC11 ENCFF692RZJ 403 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 183 bp overlap
GATA6 3 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 128 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 215 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 134 bp overlap
HOXA3 1 dataset
Motif ES_0h ES_0h-HOXA3_MA2119.1 7 bp overlap
HOXA4 1 dataset
Motif ES_0h ES_0h-HOXA4_MA1496.2 7 bp overlap
HOXA5 1 dataset
Motif ES_0h ES_0h-HOXA5_MA0158.2 8 bp overlap
HOXB13 1 dataset
Motif ES_0h ES_0h-HOXB13_MA0901.3 9 bp overlap
HOXB4 1 dataset
Motif ES_0h ES_0h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif ES_0h ES_0h-HOXC4_MA1504.2 6 bp overlap
HOXD4 1 dataset
Motif ES_0h ES_0h-HOXD4_MA1507.2 6 bp overlap
Hmga1 1 dataset
Motif ES_0h ES_0h-Hmga1_MA2124.1 8 bp overlap
Hoxa13 1 dataset
Motif ES_0h ES_0h-Hoxa13_MA0650.4 8 bp overlap
Hoxd13 1 dataset
Motif ES_0h ES_0h-Hoxd13_MA0909.4 7 bp overlap
MAFF 1 dataset
Motif ES_0h ES_0h-MAFF_MA0495.4 11 bp overlap
MEIS1 2 datasets
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MEIS3 1 dataset
Motif ES_0h ES_0h-MEIS3_MA0775.2 7 bp overlap
MYB 1 dataset
Motif ES_0h ES_0h-MYB_MA0100.4 6 bp overlap
Mafb 1 dataset
Motif ES_0h ES_0h-Mafb_MA0117.3 11 bp overlap
Mecom 1 dataset
Motif ES_0h ES_0h-Mecom_MA0029.2 11 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 146 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 156 bp overlap
NFATC4 1 dataset
ChIP WTC11 ENCFF744MZI 225 bp overlap
NFIB 1 dataset
Motif ES_0h ES_0h-NFIB_MA1643.2 17 bp overlap
NFIL3 1 dataset
Motif ES_0h ES_0h-NFIL3_MA0025.3 9 bp overlap
NFIX 1 dataset
Motif ES_0h ES_0h-NFIX_MA1528.2 14 bp overlap
NIPBL 1 dataset
ChIP WA09 GSE105028.NIPBL.WA09 403 bp overlap
NRL 1 dataset
Motif ES_0h ES_0h-NRL_MA0842.3 12 bp overlap
POLR2A 4 datasets
ChIP GM23338 ENCFF450WCS 403 bp overlap
ChIP H1 ENCFF566JSR 388 bp overlap
ChIP H1 ENCFF566JSR 305 bp overlap
ChIP H1 ENCFF833NJP 271 bp overlap
POU4F1 1 dataset
Motif ES_0h ES_0h-POU4F1_MA0790.2 12 bp overlap
POU4F2 1 dataset
Motif ES_0h ES_0h-POU4F2_MA0683.2 15 bp overlap
POU4F3 1 dataset
Motif ES_0h ES_0h-POU4F3_MA0791.2 12 bp overlap
POU5F1 3 datasets
ChIP GM23338 ENCFF333SNB 305 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 121 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 250 bp overlap
PRRX2 1 dataset
ChIP WTC11 ENCFF107JGJ 301 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 141 bp overlap
Runx1 1 dataset
Motif ES_0h ES_0h-Runx1_MA0002.3 9 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 131 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 191 bp overlap
STAT2 1 dataset
ChIP THP-1_IFNb GSE128111.STAT2.THP-1_IFNb 176 bp overlap
Sox17 1 dataset
Motif ES_0h ES_0h-Sox17_MA0078.3 10 bp overlap
Sox6 1 dataset
Motif ES_0h ES_0h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif ES_0h ES_0h-Sox7_MA2095.1 10 bp overlap
THRB 1 dataset
Motif ES_0h ES_0h-THRB_MA1576.2 18 bp overlap
ZMAT4 1 dataset
ChIP WTC11 ENCFF608UXZ 241 bp overlap
ZNF143 2 datasets
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 133 bp overlap
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 206 bp overlap
ZNF24 1 dataset
Motif ES_0h ES_0h-ZNF24_MA1124.1 13 bp overlap
ZNF274 1 dataset
Motif ES_0h ES_0h-ZNF274_MA1592.2 12 bp overlap
ZNF416 1 dataset
Motif ES_0h ES_0h-ZNF416_MA1979.2 10 bp overlap
ZNF425 1 dataset
ChIP WTC11 ENCFF359IXT 275 bp overlap
ZNF671 1 dataset
ChIP WTC11 ENCFF053HBV 265 bp overlap