chr6 : 56,854,089 56,854,420
331 bp 39 TFs 1 linked gene
This 331 bp open chromatin element is linked to DST and is bound by 39 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
DST 2.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:56,849,089 – 56,859,420
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
39 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 146 bp overlap
FOXA1 3 datasets
ChIP HepG2 ENCFF207NVJ 281 bp overlap
ChIP HepG2 ENCFF740VZW 258 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 233 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 331 bp overlap
ChIP DE DE-FOXA2-2 331 bp overlap
ChIP HepG2 ENCFF533COJ 292 bp overlap
ChIP HepG2 ENCFF570ABM 331 bp overlap
FOXP1 1 dataset
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 176 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 331 bp overlap
ChIP DE DE-GATA4-2 331 bp overlap
ChIP foregut GSE117136.GATA4.foregut 331 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 256 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 220 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 331 bp overlap
ChIP DE DE-GATA6-2 331 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 242 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 331 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 323 bp overlap
ChIP foregut GSE117136.GATA6.foregut 286 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 276 bp overlap
HNF4A 1 dataset
Motif DE_60h DE_60h-HNF4A_MA0114.5 9 bp overlap
HNF4G 1 dataset
Motif DE_60h DE_60h-HNF4G_MA0484.3 9 bp overlap
Hnf1A 2 datasets
Motif DE_60h DE_60h-Hnf1A_MA1991.2 10 bp overlap
Motif DE_72h DE_72h-Hnf1A_MA1991.2 10 bp overlap
JUNB 1 dataset
ChIP MCF10A-Er-Src_EtOH GSE115597.JUNB.MCF10A-Er-Src_EtOH 66 bp overlap
Lef1 2 datasets
Motif DE_60h DE_60h-Lef1_MA0768.3 8 bp overlap
Motif DE_72h DE_72h-Lef1_MA0768.3 8 bp overlap
NANOG 4 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 225 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 222 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 291 bp overlap
ChIP hESC GSE18292.NANOG.hESC 113 bp overlap
NFIA 1 dataset
ChIP HepG2 ENCFF815HWK 331 bp overlap
NR2F1 2 datasets
Motif DE_60h DE_60h-NR2F1_MA1537.2 13 bp overlap
Motif DE_72h DE_72h-NR2F1_MA1537.2 13 bp overlap
NR2F6 1 dataset
ChIP Hep-G2 ENCSR518WPL.NR2F6.Hep-G2 190 bp overlap
NR4A1 3 datasets
Motif DE_60h DE_60h-NR4A1_MA1112.3 8 bp overlap
Motif DE_60h DE_60h-NR4A1_MA1112.3 8 bp overlap
Motif DE_72h DE_72h-NR4A1_MA1112.3 8 bp overlap
NR4A2 1 dataset
Motif DE_60h DE_60h-NR4A2_MA0160.3 8 bp overlap
Nr2f6 2 datasets
Motif DE_60h DE_60h-Nr2f6_MA0677.2 13 bp overlap
Motif DE_72h DE_72h-Nr2f6_MA0677.2 13 bp overlap
ONECUT1 3 datasets
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 253 bp overlap
ChIP HepG2 ENCFF243FIR 304 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 293 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 331 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 331 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 250 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 331 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 300 bp overlap
SOX13 3 datasets
ChIP Hep-G2 ENCSR445ACU.SOX13.Hep-G2 245 bp overlap
ChIP HepG2 ENCFF062VSQ 272 bp overlap
ChIP HepG2 ENCFF231PAK 282 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 198 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 262 bp overlap
SOX2 2 datasets
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 269 bp overlap
ChIP hESC GSE18292.SOX2.hESC 57 bp overlap
SOX5 1 dataset
ChIP HepG2 ENCFF470KZD 269 bp overlap
SOX6 2 datasets
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 290 bp overlap
ChIP HepG2 ENCFF767OCK 331 bp overlap
Sox11 1 dataset
Motif DE_72h DE_72h-Sox11_MA0869.3 8 bp overlap
Sox17 1 dataset
Motif DE_72h DE_72h-Sox17_MA0078.3 10 bp overlap
Sox6 1 dataset
Motif DE_72h DE_72h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_72h DE_72h-Sox7_MA2095.1 10 bp overlap
TCF7 4 datasets
Motif DE_60h DE_60h-TCF7_MA0769.3 7 bp overlap
Motif DE_72h DE_72h-TCF7_MA0769.3 7 bp overlap
ChIP Hep-G2 ENCSR444LIN.TCF7.Hep-G2 241 bp overlap
ChIP HepG2 ENCFF628OFQ 331 bp overlap
TCF7L1 2 datasets
Motif DE_60h DE_60h-TCF7L1_MA1421.1 12 bp overlap
Motif DE_72h DE_72h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 5 datasets
Motif DE_60h DE_60h-TCF7L2_MA0523.2 9 bp overlap
Motif DE_72h DE_72h-TCF7L2_MA0523.2 9 bp overlap
ChIP Hep-G2 ENCSR346BOD.TCF7L2.Hep-G2 191 bp overlap
ChIP HepG2 ENCFF510OLG 331 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 183 bp overlap
ZNF449 2 datasets
Motif DE_60h DE_60h-ZNF449_MA1656.2 10 bp overlap
Motif DE_72h DE_72h-ZNF449_MA1656.2 10 bp overlap
ZNF530 1 dataset
Motif DE_60h DE_60h-ZNF530_MA1981.2 14 bp overlap
ZNF682 2 datasets
Motif DE_60h DE_60h-ZNF682_MA1599.2 11 bp overlap
Motif DE_72h DE_72h-ZNF682_MA1599.2 11 bp overlap