Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

47 transcription factors

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 359 bp overlap

Ascl2 1 dataset

Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap

CDK9 1 dataset

ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 195 bp overlap

CTCF 1 dataset

Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap

ESR1 1 dataset

ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 183 bp overlap

FOXA1 1 dataset

ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 98 bp overlap

FOXN3 1 dataset

Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap

GATA4 1 dataset

ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 83 bp overlap

HAND2 1 dataset

Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap

HDAC2 1 dataset

ChIP WA01 ENCSR000BNR.HDAC2.WA01 125 bp overlap

HOXB2::ELK1 1 dataset

Motif DE_12h DE_12h-HOXB2ELK1_MA1957.1 14 bp overlap

HOXD11 1 dataset

Motif DE_12h DE_12h-HOXD11_MA0908.2 9 bp overlap

INSM1 1 dataset

Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap

NANOG 8 datasets

ChIP H1 ENCFF747ZPQ 241 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 455 bp overlap

ChIP LNCaP_pNanog1_Dox GSE74799.NANOG.LNCaP_pNanog1_Dox 153 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 330 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 213 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 812 bp overlap

ChIP hESC GSE20650.NANOG.hESC 154 bp overlap

ChIP hESC GSE18292.NANOG.hESC 118 bp overlap

NR1D1 1 dataset

Motif DE_12h DE_12h-NR1D1_MA1531.2 14 bp overlap

PBX3 1 dataset

Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap

PGR 1 dataset

ChIP AB32 GSE31129.PGR.AB32 135 bp overlap

POU5F1 2 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 344 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 256 bp overlap

PRDM9 2 datasets

Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap

Pparg::Rxra 1 dataset

Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap

RARA 1 dataset

ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 190 bp overlap

RBPJ 1 dataset

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

RELA 1 dataset

ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 218 bp overlap

RELB 1 dataset

ChIP L1236 GSE63736.RELB.L1236 143 bp overlap

Rhox11 1 dataset

Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap

SIX2 3 datasets

ChIP HEK GSE73865.SIX2.HEK 245 bp overlap

ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 193 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 231 bp overlap

SMARCB1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 200 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 235 bp overlap

SOX2 2 datasets

ChIP hESC GSE18292.SOX2.hESC 95 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 314 bp overlap

SOX8 1 dataset

ChIP RH4_DMSO-6H GSE116344.SOX8.RH4_DMSO-6H 204 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 185 bp overlap

TBX20 1 dataset

Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 122 bp overlap

THRA 1 dataset

Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap

THRB 1 dataset

Motif DE_12h DE_12h-THRB_MA1576.2 18 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 195 bp overlap

ZNF140 1 dataset

Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap

ZNF16 1 dataset

Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap

ZNF189 1 dataset

Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap

ZNF282 1 dataset

Motif DE_12h DE_12h-ZNF282_MA1154.2 15 bp overlap

ZNF384 1 dataset

Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap

ZNF462 1 dataset

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 173 bp overlap

ZNF582 1 dataset

Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap

ZNF667 1 dataset

Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap

ZNF677 1 dataset

Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap

ZNF684 1 dataset

Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap

ZNF707 1 dataset

Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap

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