chr5 : 95,655,711 – 95,655,881
170 bp 51 TFs 1 linked gene
This 170 bp open chromatin element is linked to RFESD and is bound by 51 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RFESD 8.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:95,650,711 – 95,660,881
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 170 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.AR.primary-prostate-cancer_P2_DSG 170 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 159 bp overlap
BCL11A 4 datasets
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 53 bp overlap
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 53 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 88 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 129 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 161 bp overlap
DACH1 1 dataset
ChIP K562 ENCFF574LOW 170 bp overlap
DPF1 2 datasets
ChIP K-562 GSE97661.DPF1.K-562 153 bp overlap
ChIP MCF-7 GSE97661.DPF1.MCF-7 126 bp overlap
ESR1 11 datasets
ChIP Ishikawa_E2 GSE109891.ESR1.Ishikawa_E2 93 bp overlap
ChIP MCF-7 GSE76893.ESR1.MCF-7 170 bp overlap
ChIP MCF-7 GSE45822.ESR1.MCF-7 170 bp overlap
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 170 bp overlap
ChIP MCF-7_E2 GSE60270.ESR1.MCF-7_E2 170 bp overlap
ChIP MCF-7_E2 GSE108883.ESR1.MCF-7_E2 124 bp overlap
ChIP MCF-7_HC11 GSE102882.ESR1.MCF-7_HC11 91 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 168 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 170 bp overlap
ChIP MCF-7_shTEAD4 GSE125594.ESR1.MCF-7_shTEAD4 165 bp overlap
ChIP MCF-7_shYAP1 GSE125594.ESR1.MCF-7_shYAP1 124 bp overlap
ESR1_D538G 2 datasets
ChIP MCF-7_E2 GSE94493.ESR1_D538G.MCF-7_E2 106 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_D538G.MCF-7_dox_E2 141 bp overlap
ESR1_Y537N 1 dataset
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 146 bp overlap
ESR1_Y537S 2 datasets
ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 170 bp overlap
ChIP MCF-7_dox GSE94493.ESR1_Y537S.MCF-7_dox 108 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 150 bp overlap
FOSL1 2 datasets
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 170 bp overlap
ChIP K562 ENCFF455MKD 170 bp overlap
FOXA1 1 dataset
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 170 bp overlap
GABPA 1 dataset
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 157 bp overlap
GATA1 14 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 170 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 155 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 142 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 170 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 131 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 141 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 170 bp overlap
ChIP erythroblast ENCFF867JAR 170 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 170 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 153 bp overlap
ChIP erythroid-progenitor_EPrec GSE124163.GATA1.erythroid-progenitor_EPrec 170 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 170 bp overlap
ChIP erythroid_Don002 GSE137982.GATA1.erythroid_Don002 170 bp overlap
ChIP erythroid_Don003 GSE137982.GATA1.erythroid_Don003 170 bp overlap
GATA2 8 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 170 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 170 bp overlap
ChIP K562 ENCFF830LLA 170 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 148 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 162 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 170 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 93 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 134 bp overlap
GATA3 4 datasets
ChIP MCF-7_E2 GSE60270.GATA3.MCF-7_E2 150 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 142 bp overlap
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 91 bp overlap
ChIP MCF-7_ICI GSE81510.GATA3.MCF-7_ICI 114 bp overlap
GATA3_Nter 1 dataset
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 122 bp overlap
GATA4 8 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 161 bp overlap
ChIP DE DE-GATA4-1 170 bp overlap
ChIP DE DE-GATA4-2 170 bp overlap
ChIP G296S GSE85628.GATA4.G296S 170 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 170 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 170 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 143 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 170 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 170 bp overlap
ChIP DE DE-GATA6-2 170 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 170 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 170 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 170 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 170 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 170 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 170 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 170 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 170 bp overlap
HOXB13 1 dataset
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 57 bp overlap
KLF1 1 dataset
ChIP erythroid_R3R4 GSE43625.KLF1.erythroid_R3R4 59 bp overlap
KMT2A 1 dataset
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 145 bp overlap
L3MBTL2 1 dataset
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 170 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 170 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 170 bp overlap
ChIP K562 ENCFF320GSD 170 bp overlap
MITF 2 datasets
ChIP K-562 ENCSR797SWM.MITF.K-562 170 bp overlap
ChIP K562 ENCFF731XJJ 170 bp overlap
MYB 1 dataset
ChIP Loucy GSE94000.MYB.Loucy 170 bp overlap
NFE2 2 datasets
ChIP ProEs GSE59087.NFE2.ProEs 166 bp overlap
ChIP erythroid_R3R4 GSE43625.NFE2.erythroid_R3R4 69 bp overlap
NR3C1 1 dataset
ChIP NALM-6 GSE67046.NR3C1.NALM-6 109 bp overlap
NRF1 1 dataset
ChIP K-562 ENCSR494TDU.NRF1.K-562 170 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 170 bp overlap
PAX5 1 dataset
ChIP NALM-6 GSE126300.PAX5.NALM-6 81 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 170 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 135 bp overlap
ChIP K562 ENCFF286KMN 112 bp overlap
PKNOX1 2 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 170 bp overlap
ChIP K562 ENCFF236IUS 122 bp overlap
POLR2A 2 datasets
ChIP erythroblast ENCFF498VMR 170 bp overlap
ChIP erythroblast ENCFF498VMR 170 bp overlap
RBFOX2 2 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 170 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 170 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 138 bp overlap
RUNX1 1 dataset
ChIP NALM-6 GSE126300.RUNX1.NALM-6 170 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 85 bp overlap
SMAD5 1 dataset
ChIP K-562 ENCSR000FCD.SMAD5.K-562 104 bp overlap
SUZ12 1 dataset
ChIP ProEs GSE59087.SUZ12.ProEs 164 bp overlap
TAL1 3 datasets
ChIP CD34 GSE52924.TAL1.CD34 170 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 170 bp overlap
ChIP erythroid GSE42390.TAL1.erythroid 133 bp overlap
TBX5 1 dataset
ChIP hiPSC GSE81585.TBX5.hiPSC 168 bp overlap
TP63 4 datasets
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 137 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 170 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 134 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 136 bp overlap
USF1 4 datasets
ChIP H1 ENCFF090WVU 170 bp overlap
ChIP K-562 ENCSR000BKT.USF1.K-562 163 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 168 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 163 bp overlap
USF2 2 datasets
ChIP K-562 ENCSR359NFW.USF2.K-562 170 bp overlap
ChIP K562 ENCFF306QPU 170 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 107 bp overlap
ZNF79 1 dataset
ChIP K-562 ENCSR995FUM.ZNF79.K-562 170 bp overlap
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