chr5 : 90,562,355 – 90,562,667
312 bp 48 TFs 1 linked gene
This 312 bp open chromatin element is linked to ADGRV1 and is bound by 48 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ADGRV1 3.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:90,557,355 – 90,567,667
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
48 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 238 bp overlap
AR 4 datasets
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 86 bp overlap
ChIP LNCaP_R1881 GSE62492.AR.LNCaP_R1881 167 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 75 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 116 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 216 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 201 bp overlap
BRD4 3 datasets
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 159 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 280 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 213 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 218 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 251 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 274 bp overlap
ESR1 1 dataset
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 259 bp overlap
FOXA1 32 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 59 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 170 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 57 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 60 bp overlap
ChIP LNCaP-C4-2B GSE40050.FOXA1.LNCaP-C4-2B 166 bp overlap
ChIP LNCaP-C4-2B_DHT GSE40050.FOXA1.LNCaP-C4-2B_DHT 53 bp overlap
ChIP LNCaP_DHT24H GSE58428.FOXA1.LNCaP_DHT24H 149 bp overlap
ChIP LNCaP_DMSO GSE114274.FOXA1.LNCaP_DMSO 95 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 168 bp overlap
ChIP LNCaP_S2101-4H GSE114266.FOXA1.LNCaP_S2101-4H 87 bp overlap
ChIP LNCaP_UPF1069 GSE114274.FOXA1.LNCaP_UPF1069 66 bp overlap
ChIP MCF-7 ENCFF465LTH 53 bp overlap
ChIP MCF-7_JC4695 GSE126004.FOXA1.MCF-7_JC4695 164 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 114 bp overlap
ChIP MCF-7_TamR GSE128445.FOXA1.MCF-7_TamR 266 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 147 bp overlap
ChIP MCF-7_shNR2F2 GSE132432.FOXA1.MCF-7_shNR2F2 86 bp overlap
ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 57 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 118 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 208 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 78 bp overlap
ChIP ZR-75-1_vehicle_ab1 GSE112969.FOXA1.ZR-75-1_vehicle_ab1 69 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 72 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 82 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 97 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 88 bp overlap
ChIP breast-cancer_Herceptin-ICI GSE101407.FOXA1.breast-cancer_Herceptin-ICI 107 bp overlap
ChIP breast-cancer_heregulin-ICI GSE101407.FOXA1.breast-cancer_heregulin-ICI 80 bp overlap
ChIP breast_tumor_Male_13 GSE104399.FOXA1.breast_tumor_Male_13 312 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 293 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 59 bp overlap
ChIP prostate_P13_T GSE130408.FOXA1.prostate_P13_T 50 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 219 bp overlap
HOXB13 1 dataset
ChIP LNCaP GSE56288.HOXB13.LNCaP 52 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 150 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 113 bp overlap
JUN 1 dataset
ChIP MCF-7_TamR_BD610326 GSE128445.JUN.MCF-7_TamR_BD610326 72 bp overlap
KLF1 3 datasets
ChIP HEK293 ENCFF159QSW 312 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 281 bp overlap
ChIP HEK293 GSE76494.KLF1.HEK293 236 bp overlap
KLF15 1 dataset
ChIP HEK293 GSE76494.KLF15.HEK293 162 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 151 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 132 bp overlap
KMT2A 1 dataset
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 312 bp overlap
MAFK 1 dataset
ChIP A549 ENCFF371EPR 209 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 203 bp overlap
NEUROD1 2 datasets
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 233 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 216 bp overlap
OGT 1 dataset
ChIP PC-3_OSMI-2 GSE112667.OGT.PC-3_OSMI-2 135 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH3 GSE83726.PAX3-FOXO1.RH3 191 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 89 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 236 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 213 bp overlap
POU5F1 1 dataset
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 148 bp overlap
RAD21 1 dataset
ChIP MCF-7_E2_SHCTCF ERP000209.RAD21.MCF-7_E2_SHCTCF 56 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 269 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap
SMARCA4 2 datasets
ChIP NSC GSE125033.SMARCA4.NSC 312 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 206 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 218 bp overlap
SP3 2 datasets
ChIP HEK293 ENCFF087XLA 312 bp overlap
ChIP HEK293 ENCSR141PZA.SP3.HEK293 209 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 271 bp overlap
STAT3 5 datasets
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 50 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 147 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 138 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 166 bp overlap
ChIP MCF-7_jc5848 GSE126004.STAT3.MCF-7_jc5848 54 bp overlap
THAP1 1 dataset
ChIP K-562 ENCSR000BNN.THAP1.K-562 114 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 147 bp overlap
ZBTB20 1 dataset
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 136 bp overlap
ZBTB44 1 dataset
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 204 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 239 bp overlap
ZNF217 1 dataset
ChIP MCF-7 ENCSR465XQW.ZNF217.MCF-7 111 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR695EQB.ZNF24.K-562 209 bp overlap
ZNF263 2 datasets
ChIP HEK293 ENCFF336CWQ 312 bp overlap
ChIP HEK293 ENCFF336CWQ 312 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 252 bp overlap
ZNF335 3 datasets
ChIP HEK293 ENCFF784SLD 312 bp overlap
ChIP HEK293 ENCFF784SLD 312 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 263 bp overlap
ZNF350 1 dataset
ChIP HEK293 GSE76494.ZNF350.HEK293 211 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 306 bp overlap
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