chr5 : 21,070,340 – 21,071,167

827 bp 48 TFs 0 linked genes

This 827 bp open chromatin element has no linked target genes and is bound by 48 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

48 transcription factors

Arid3a 1 dataset

Motif ES_0h ES_0h-Arid3a_MA0151.1 6 bp overlap

FOXA1 1 dataset

ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 147 bp overlap

FOXE1 2 datasets

Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap

Motif ES_0h ES_0h-FOXE1_MA1487.3 12 bp overlap

GATA6 2 datasets

ChIP DE_D1 S14-DE-d1-GATA6-exp1 222 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 208 bp overlap

Hmga1 1 dataset

Motif ES_0h ES_0h-Hmga1_MA2124.1 8 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

MITF 1 dataset

ChIP 501-mel GSE137522.MITF.501-mel 269 bp overlap

Mafb 2 datasets

Motif DE_12h DE_12h-Mafb_MA0117.3 11 bp overlap

Motif ES_0h ES_0h-Mafb_MA0117.3 11 bp overlap

NANOG 3 datasets

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 274 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 223 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 253 bp overlap

NFATC3 2 datasets

Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap

Motif ES_0h ES_0h-NFATC3_MA0625.3 6 bp overlap

Nfat5 2 datasets

Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap

Motif ES_0h ES_0h-Nfat5_MA0606.3 8 bp overlap

Nfatc1 2 datasets

Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap

Motif ES_0h ES_0h-Nfatc1_MA0624.3 6 bp overlap

OSR2 2 datasets

Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap

Motif ES_0h ES_0h-OSR2_MA1646.2 8 bp overlap

POU1F1 2 datasets

Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap

Motif ES_0h ES_0h-POU1F1_MA0784.3 14 bp overlap

POU2F1 5 datasets

ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 207 bp overlap

ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 302 bp overlap

Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap

ChIP T-47D GSE148277.POU2F1.T-47D 258 bp overlap

ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 255 bp overlap

POU2F2 2 datasets

Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap

Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap

POU2F3 1 dataset

ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 214 bp overlap

POU3F1 1 dataset

Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap

POU3F2 2 datasets

Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap

Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap

POU3F3 1 dataset

Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap

POU3F4 1 dataset

Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap

POU4F1 1 dataset

Motif ES_0h ES_0h-POU4F1_MA0790.2 12 bp overlap

POU4F2 2 datasets

Motif ES_0h ES_0h-POU4F2_MA0683.2 15 bp overlap

ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 145 bp overlap

POU4F3 1 dataset

Motif ES_0h ES_0h-POU4F3_MA0791.2 12 bp overlap

POU5F1 2 datasets

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 229 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 346 bp overlap

POU5F1B 1 dataset

Motif ES_0h ES_0h-POU5F1B_MA0792.1 9 bp overlap

Pparg::Rxra 2 datasets

Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap

Motif ES_0h ES_0h-PpargRxra_MA0065.3 13 bp overlap

RBPJ 1 dataset

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 269 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 227 bp overlap

SMARCC1 2 datasets

ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 232 bp overlap

ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCC1.SK-N-MC_shEWSFLI1 111 bp overlap

SOX2 2 datasets

ChIP HNSC GSE69479.SOX2.HNSC 271 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 235 bp overlap

SP4 2 datasets

Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap

Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap

SP5 2 datasets

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap

SPIB 2 datasets

Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap

Motif ES_0h ES_0h-SPIB_MA0081.3 13 bp overlap

STAT3 1 dataset

ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 122 bp overlap

Spi1 2 datasets

Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap

Motif ES_0h ES_0h-Spi1_MA0080.7 13 bp overlap

TFAP2A 2 datasets

Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap

Motif ES_0h ES_0h-TFAP2A_MA0810.2 11 bp overlap

TFAP2B 2 datasets

Motif DE_12h DE_12h-TFAP2B_MA0811.2 11 bp overlap

Motif ES_0h ES_0h-TFAP2B_MA0811.2 11 bp overlap

TFAP2C 5 datasets

Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap

Motif ES_0h ES_0h-TFAP2C_MA0524.3 11 bp overlap

ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 162 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 243 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 207 bp overlap

Tfcp2l1 2 datasets

Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap

Motif ES_0h ES_0h-Tfcp2l1_MA0145.2 14 bp overlap

ZFP42 1 dataset

Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap

ZNF263 2 datasets

Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap

Motif ES_0h ES_0h-ZNF263_MA0528.3 7 bp overlap

ZNF320 2 datasets

Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap

Motif ES_0h ES_0h-ZNF320_MA1976.2 20 bp overlap

ZNF331 2 datasets

Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap

Motif ES_0h ES_0h-ZNF331_MA1726.2 10 bp overlap

ZNF384 2 datasets

Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap

Motif ES_0h ES_0h-ZNF384_MA1125.2 8 bp overlap

ZNF701 2 datasets

Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap

Motif ES_0h ES_0h-ZNF701_MA1987.2 17 bp overlap

Zfp809 1 dataset

Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap