chr1 : 87,464,031 87,464,217
186 bp 36 TFs 0 linked genes
This 186 bp open chromatin element has no linked target genes and is bound by 36 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:87,459,031 – 87,469,217
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
36 transcription factors
Source
Cell type
AR 4 datasets
ChIP LNCaP_SHFOXA1_R1881 GSE37345.AR.LNCaP_SHFOXA1_R1881 141 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 146 bp overlap
ChIP prostate GSE56288.AR.prostate 126 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 186 bp overlap
ARID3A 1 dataset
ChIP GM12878 ENCFF006WWZ 186 bp overlap
ASH2L 2 datasets
ChIP GM12878 ENCSR849WCQ.ASH2L.GM12878 186 bp overlap
ChIP VCaP_R1881 GSE60841.ASH2L.VCaP_R1881 150 bp overlap
ATF2 1 dataset
ChIP GM12878 ENCFF521LQJ 121 bp overlap
BATF 1 dataset
ChIP OCI-Ly10 GSE56857.BATF.OCI-Ly10 144 bp overlap
BATF3 1 dataset
ChIP GM12878 GSE97661.BATF3.GM12878 127 bp overlap
BRD4 6 datasets
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 186 bp overlap
ChIP GM15850_PA1_JQ1 GSE99402.BRD4.GM15850_PA1_JQ1 52 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 186 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 186 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 186 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 183 bp overlap
CTCF 2 datasets
ChIP thyroid gland ENCFF204HWS 186 bp overlap
ChIP thyroid-gland ENCSR955BIB.CTCF.thyroid-gland 186 bp overlap
EED 1 dataset
ChIP GM12878 ENCFF266FYW 104 bp overlap
ETV6 2 datasets
ChIP GM12878 ENCFF105ZMI 65 bp overlap
ChIP GM12878 GSE97661.ETV6.GM12878 84 bp overlap
FOXA1 1 dataset
ChIP LNCaP_TFS GSE123618.FOXA1.LNCaP_TFS 78 bp overlap
HOXB13 1 dataset
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 142 bp overlap
IKZF1 1 dataset
ChIP GM12878 ENCFF753XDO 186 bp overlap
IKZF2 2 datasets
ChIP GM12878 ENCFF238LYK 146 bp overlap
ChIP GM12878 ENCFF918AID 124 bp overlap
IRF4 4 datasets
ChIP B-cell GSE142493.IRF4.B-cell 141 bp overlap
ChIP GM12878 ENCFF769ZDL 186 bp overlap
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 177 bp overlap
ChIP OCI-Ly10 GSE142493.IRF4.OCI-Ly10 186 bp overlap
JUNB 1 dataset
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 186 bp overlap
MAX 2 datasets
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 117 bp overlap
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 105 bp overlap
MED1 2 datasets
ChIP SGBS GSE64233.MED1.SGBS 136 bp overlap
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 186 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 133 bp overlap
NFIC 2 datasets
ChIP GM12878 ENCFF259FWL 183 bp overlap
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 75 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 85 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 186 bp overlap
NR3C1 1 dataset
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 166 bp overlap
POLR2A 1 dataset
ChIP thyroid gland ENCFF979LRR 186 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 96 bp overlap
RBPJ 2 datasets
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 186 bp overlap
ChIP MUTUL GSE75503.RBPJ.MUTUL 105 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 186 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 186 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 107 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 106 bp overlap
STAG2 3 datasets
ChIP HCAEC GSE101921.STAG2.HCAEC 186 bp overlap
ChIP HMEC-1 GSE101921.STAG2.HMEC-1 109 bp overlap
ChIP MCF-10A_siSTAG1 GSE101921.STAG2.MCF-10A_siSTAG1 80 bp overlap
TCF7L2 2 datasets
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 186 bp overlap
ChIP HCT116 ENCFF038POZ 186 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 100 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 144 bp overlap
ZFP91 2 datasets
ChIP K-562 ENCSR898XMH.ZFP91.K-562 186 bp overlap
ChIP K562 ENCFF501CDP 186 bp overlap
ZNF449 1 dataset
ChIP HEK293 GSE76494.ZNF449.HEK293 77 bp overlap