Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

37 transcription factors

ARID2 1 dataset

ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 303 bp overlap

ATRX 1 dataset

ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 304 bp overlap

BCOR 1 dataset

ChIP WA01 GSE104690.BCOR.WA01 111 bp overlap

BRD4 3 datasets

ChIP CLB-Ga GSE133453.BRD4.CLB-Ga 173 bp overlap

ChIP CLB-Ga_Dinaciclib GSE133453.BRD4.CLB-Ga_Dinaciclib 296 bp overlap

ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 100 bp overlap

CDK9 2 datasets

ChIP Kelly_CYC065 GSE107126.CDK9.Kelly_CYC065 347 bp overlap

ChIP Kelly_DMSO GSE107126.CDK9.Kelly_DMSO 347 bp overlap

CHD1 1 dataset

ChIP WA01 ENCSR000AQK.CHD1.WA01 224 bp overlap

CREB1 1 dataset

ChIP WA01 ENCSR000BSN.CREB1.WA01 145 bp overlap

CREB5 1 dataset

ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 347 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 308 bp overlap

CUX1 1 dataset

Motif DE_12h DE_12h-CUX1_MA0754.3 9 bp overlap

DPRX 1 dataset

Motif DE_12h DE_12h-DPRX_MA1480.2 9 bp overlap

EGR2 1 dataset

Motif DE_12h DE_12h-EGR2_MA0472.2 11 bp overlap

EGR3 1 dataset

Motif DE_12h DE_12h-EGR3_MA0732.2 11 bp overlap

EGR4 1 dataset

Motif DE_12h DE_12h-EGR4_MA0733.2 11 bp overlap

EWSR1-FLI1 1 dataset

Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap

EZH2 10 datasets

ChIP GM12878 ENCFF635TDF 252 bp overlap

ChIP GM23338 ENCFF613YON 347 bp overlap

ChIP GM23338 ENCFF886DXX 190 bp overlap

ChIP H1 ENCFF232NZA 347 bp overlap

ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 256 bp overlap

ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 347 bp overlap

ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 334 bp overlap

ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 258 bp overlap

ChIP neural progenitor cell ENCFF018MKA 347 bp overlap

ChIP neural progenitor cell ENCFF472NFV 347 bp overlap

EZH2_phosphoT487 1 dataset

ChIP hepatocyte ENCSR341VYI.EZH2_phosphoT487.hepatocyte 123 bp overlap

GATA2 1 dataset

ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 229 bp overlap

GATA6 1 dataset

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 291 bp overlap

JARID2 1 dataset

ChIP MRC-5_IPS25 GSE48516.JARID2.MRC-5_IPS25 347 bp overlap

MED1 1 dataset

ChIP G296S_4 GSE85628.MED1.G296S_4 342 bp overlap

MXI1 1 dataset

ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 96 bp overlap

MYC 1 dataset

ChIP NB69 GSE138295.MYC.NB69 270 bp overlap

MYCN 4 datasets

ChIP COG-N-415 GSE138295.MYCN.COG-N-415 311 bp overlap

ChIP Kelly GSE94822.MYCN.Kelly 213 bp overlap

ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 156 bp overlap

ChIP LA-N-5 GSE138295.MYCN.LA-N-5 280 bp overlap

PITX3 1 dataset

ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 337 bp overlap

Prdm5 1 dataset

Motif DE_12h DE_12h-Prdm5_MA1999.2 11 bp overlap

RNF2 2 datasets

ChIP H1 ENCFF239FFS 347 bp overlap

ChIP HUES-64 GSE104059.RNF2.HUES-64 347 bp overlap

RYBP 1 dataset

ChIP WA01 GSE104690.RYBP.WA01 244 bp overlap

SIN3A 1 dataset

ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 213 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 55 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 83 bp overlap

SMARCA4 2 datasets

ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 144 bp overlap

ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 338 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 133 bp overlap

SP2 1 dataset

Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap

SS18 3 datasets

ChIP SYO-1 GSE108025.SS18.SYO-1 312 bp overlap

ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 269 bp overlap

ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 347 bp overlap

SUZ12 5 datasets

ChIP H1 ENCFF507HGF 264 bp overlap

ChIP H1 ENCFF881NFR 347 bp overlap

ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 210 bp overlap

ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 287 bp overlap

ChIP WA01 ENCSR000EUQ.SUZ12.WA01 347 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 92 bp overlap

ZNF257 1 dataset

Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap

Genome Browser