chr4 : 166,198,643 166,199,078
435 bp 82 TFs 0 linked genes
This 435 bp open chromatin element has no linked target genes and is bound by 82 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:166,193,643 – 166,204,078
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
82 transcription factors
Source
Cell type
ALX3 1 dataset
Motif ES_0h ES_0h-ALX3_MA0634.2 6 bp overlap
AR 1 dataset
ChIP MCF-7 GSE48930.AR.MCF-7 79 bp overlap
ARGFX 1 dataset
Motif ES_0h ES_0h-ARGFX_MA1463.2 8 bp overlap
Arx 1 dataset
Motif ES_0h ES_0h-Arx_MA0874.2 10 bp overlap
BRD2 1 dataset
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 418 bp overlap
BRD4 5 datasets
ChIP HAP1 GSE108387.BRD4.HAP1 161 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 153 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 51 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 189 bp overlap
ChIP hESC GSE33281.BRD4.hESC 123 bp overlap
CEBPB 2 datasets
ChIP MCF-7 ENCFF772ZTQ 166 bp overlap
ChIP MCF-7 ENCSR000BSR.CEBPB.MCF-7 105 bp overlap
CTCF 31 datasets
ChIP D54 ENCSR000DKN.CTCF.D54 171 bp overlap
ChIP GM23338 ENCFF531QOI 301 bp overlap
ChIP GM23338 ENCFF772DML 58 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 197 bp overlap
ChIP H54 ENCFF255TVO 201 bp overlap
ChIP H9 ENCFF152GTF 212 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 231 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 245 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 125 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 209 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 187 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 116 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 159 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 129 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 330 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 151 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 131 bp overlap
ChIP delta-47 GSE70764.CTCF.delta-47 172 bp overlap
ChIP endodermal cell ENCFF471YCZ 219 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 147 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 435 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 172 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 152 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 199 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 199 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 151 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 111 bp overlap
ChIP neural progenitor cell ENCFF420RBO 294 bp overlap
ChIP neural progenitor cell ENCFF420RBO 350 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 110 bp overlap
CTCFL 1 dataset
ChIP delta-47 GSE70764.CTCFL.delta-47 234 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 328 bp overlap
DRGX 1 dataset
Motif ES_0h ES_0h-DRGX_MA1481.2 6 bp overlap
EMX1 1 dataset
Motif ES_0h ES_0h-EMX1_MA0612.3 6 bp overlap
EMX2 1 dataset
Motif ES_0h ES_0h-EMX2_MA0886.2 6 bp overlap
EN1 1 dataset
Motif ES_0h ES_0h-EN1_MA0027.3 6 bp overlap
ESR1 1 dataset
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 73 bp overlap
ESX1 1 dataset
Motif ES_0h ES_0h-ESX1_MA0644.3 7 bp overlap
EVX1 1 dataset
Motif ES_0h ES_0h-EVX1_MA0887.2 6 bp overlap
EVX2 1 dataset
Motif ES_0h ES_0h-EVX2_MA0888.2 6 bp overlap
FOXA1 3 datasets
ChIP MCF-7 ERP001226.FOXA1.MCF-7 77 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 90 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 128 bp overlap
GSX1 1 dataset
Motif ES_0h ES_0h-GSX1_MA0892.2 6 bp overlap
GSX2 1 dataset
Motif ES_0h ES_0h-GSX2_MA0893.3 7 bp overlap
HOXA1 1 dataset
Motif ES_0h ES_0h-HOXA1_MA1495.2 6 bp overlap
HOXA2 1 dataset
Motif ES_0h ES_0h-HOXA2_MA0900.3 6 bp overlap
HOXA3 1 dataset
Motif ES_0h ES_0h-HOXA3_MA2119.1 7 bp overlap
HOXA5 1 dataset
Motif ES_0h ES_0h-HOXA5_MA0158.2 8 bp overlap
HOXA6 1 dataset
Motif ES_0h ES_0h-HOXA6_MA1497.2 7 bp overlap
HOXB1 1 dataset
Motif ES_0h ES_0h-HOXB1_MA2093.1 7 bp overlap
HOXB2 1 dataset
Motif ES_0h ES_0h-HOXB2_MA0902.3 6 bp overlap
HOXB3 1 dataset
Motif ES_0h ES_0h-HOXB3_MA0903.2 6 bp overlap
HOXB5 1 dataset
Motif ES_0h ES_0h-HOXB5_MA0904.3 6 bp overlap
HOXB6 1 dataset
Motif ES_0h ES_0h-HOXB6_MA1500.2 7 bp overlap
HOXB7 1 dataset
Motif ES_0h ES_0h-HOXB7_MA1501.2 7 bp overlap
HOXB8 1 dataset
Motif ES_0h ES_0h-HOXB8_MA1502.2 7 bp overlap
HOXC8 1 dataset
Motif ES_0h ES_0h-HOXC8_MA1505.2 6 bp overlap
HOXD3 1 dataset
Motif ES_0h ES_0h-HOXD3_MA0912.2 8 bp overlap
HOXD8 1 dataset
Motif ES_0h ES_0h-HOXD8_MA0910.3 7 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 435 bp overlap
ISX 1 dataset
Motif ES_0h ES_0h-ISX_MA0654.2 6 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 201 bp overlap
LHX5 1 dataset
Motif ES_0h ES_0h-LHX5_MA1519.2 7 bp overlap
LHX6 1 dataset
Motif ES_0h ES_0h-LHX6_MA0658.2 8 bp overlap
LMX1A 1 dataset
Motif ES_0h ES_0h-LMX1A_MA0702.3 7 bp overlap
LMX1B 1 dataset
Motif ES_0h ES_0h-LMX1B_MA0703.3 8 bp overlap
Lhx1 1 dataset
Motif ES_0h ES_0h-Lhx1_MA1518.3 10 bp overlap
Lhx4 1 dataset
Motif ES_0h ES_0h-Lhx4_MA0704.2 6 bp overlap
Lhx8 1 dataset
Motif ES_0h ES_0h-Lhx8_MA0705.2 6 bp overlap
MCRS1 1 dataset
ChIP Huh-7 GSE97411.MCRS1.Huh-7 107 bp overlap
MEOX1 1 dataset
Motif ES_0h ES_0h-MEOX1_MA0661.2 7 bp overlap
MEOX2 1 dataset
Motif ES_0h ES_0h-MEOX2_MA0706.2 7 bp overlap
MIXL1 1 dataset
Motif ES_0h ES_0h-MIXL1_MA0662.2 6 bp overlap
MNX1 1 dataset
Motif ES_0h ES_0h-MNX1_MA0707.3 6 bp overlap
MYC 1 dataset
ChIP U2OS_SHRCTR GSE77356.MYC.U2OS_SHRCTR 103 bp overlap
NKX6-1 1 dataset
Motif ES_0h ES_0h-NKX6-1_MA0674.2 7 bp overlap
NKX6-2 1 dataset
Motif ES_0h ES_0h-NKX6-2_MA0675.2 6 bp overlap
NOTO 1 dataset
Motif ES_0h ES_0h-NOTO_MA0710.2 7 bp overlap
NR1I3 1 dataset
Motif ES_0h ES_0h-NR1I3_MA1534.2 8 bp overlap
Nr2e3 1 dataset
Motif ES_0h ES_0h-Nr2e3_MA0164.2 6 bp overlap
PDX1 1 dataset
Motif ES_0h ES_0h-PDX1_MA0132.3 6 bp overlap
POU5F1 2 datasets
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 435 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 352 bp overlap
POU6F1 1 dataset
Motif ES_0h ES_0h-POU6F1_MA0628.2 6 bp overlap
PRRX1 1 dataset
Motif ES_0h ES_0h-PRRX1_MA0716.2 6 bp overlap
RAD21 7 datasets
ChIP H1 ENCFF698EWO 212 bp overlap
ChIP H1 ENCFF967OJF 201 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 133 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 110 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 152 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 116 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 171 bp overlap
RARA 1 dataset
Motif ES_0h ES_0h-RARA_MA0729.1 18 bp overlap
RAX2 1 dataset
Motif ES_0h ES_0h-RAX2_MA0717.2 6 bp overlap
RBPJ 1 dataset
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 92 bp overlap
Rarb 1 dataset
Motif ES_0h ES_0h-Rarb_MA0857.1 16 bp overlap
Rarg 1 dataset
Motif ES_0h ES_0h-Rarg_MA0859.2 15 bp overlap
SHOX 1 dataset
Motif ES_0h ES_0h-SHOX_MA0630.2 6 bp overlap
SMARCC1 1 dataset
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 154 bp overlap
Shox2 1 dataset
Motif ES_0h ES_0h-Shox2_MA0720.2 6 bp overlap
TFAP2A 2 datasets
ChIP MCF-7_E2 GSE60270.TFAP2A.MCF-7_E2 69 bp overlap
ChIP WA09 GSE105081.TFAP2A.WA09 123 bp overlap
TFAP2C 4 datasets
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 79 bp overlap
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 130 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 435 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 435 bp overlap
TLX2 1 dataset
Motif ES_0h ES_0h-TLX2_MA1577.2 6 bp overlap
UNCX 1 dataset
Motif ES_0h ES_0h-UNCX_MA0721.2 6 bp overlap
VAX1 1 dataset
Motif ES_0h ES_0h-VAX1_MA0722.2 7 bp overlap
VAX2 1 dataset
Motif ES_0h ES_0h-VAX2_MA0723.3 6 bp overlap
VSX1 1 dataset
Motif ES_0h ES_0h-VSX1_MA0725.2 7 bp overlap
VSX2 1 dataset
Motif ES_0h ES_0h-VSX2_MA0726.2 7 bp overlap
YY1 5 datasets
ChIP Huh-7 GSE97411.YY1.Huh-7 306 bp overlap
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 121 bp overlap
ChIP NT2/D1 ENCFF999MII 213 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 103 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 109 bp overlap
ZNF214 1 dataset
Motif ES_0h ES_0h-ZNF214_MA1975.2 13 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 196 bp overlap
mix-a 1 dataset
Motif ES_0h ES_0h-mix-a_MA0621.2 7 bp overlap