chr4 : 113,946,160 113,946,424
264 bp 46 TFs 0 linked genes
This 264 bp open chromatin element has no linked target genes and is bound by 46 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:113,941,160 – 113,951,424
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
46 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 176 bp overlap
BRD2 1 dataset
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 143 bp overlap
BRD4 14 datasets
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 235 bp overlap
ChIP HCC1395 GSE63581.BRD4.HCC1395 162 bp overlap
ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 73 bp overlap
ChIP MDA-MB-231_JQ1-neg_L GSE136151.BRD4.MDA-MB-231_JQ1-neg_L 67 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 152 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 151 bp overlap
ChIP SUM159PT_100nMtrametinib_4h GSE87418.BRD4.SUM159PT_100nMtrametinib_4h 205 bp overlap
ChIP SUM159PT_100nMtrametinib_8h GSE87418.BRD4.SUM159PT_100nMtrametinib_8h 264 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 245 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 198 bp overlap
ChIP SUM159PT_DMSO_8h GSE87418.BRD4.SUM159PT_DMSO_8h 253 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 127 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 264 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 230 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 96 bp overlap
CEBPA 1 dataset
ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 107 bp overlap
CEBPB 1 dataset
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 58 bp overlap
CTCF 20 datasets
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 213 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 233 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 237 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 200 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 164 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 188 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 142 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 229 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 216 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 194 bp overlap
ChIP chondrocyte ENCFF134ORZ 160 bp overlap
ChIP chondrocyte ENCFF134ORZ 264 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 208 bp overlap
ChIP fibroblast of villous mesenchyme ENCFF345VQO 264 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 160 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ANE.CTCF.myoblast_skeletal_muscle 148 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 157 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 181 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 163 bp overlap
ChIP skeletal muscle myoblast ENCFF813BQI 143 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCFF451CNG 126 bp overlap
FOS 4 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 264 bp overlap
ChIP IMR-90 ENCFF179EDA 100 bp overlap
ChIP endothelial cell of umbilical vein ENCFF415XBG 114 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 147 bp overlap
FOSL2 4 datasets
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 148 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 170 bp overlap
ChIP SK-N-SH ENCFF127ZDW 76 bp overlap
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 55 bp overlap
FOXA2 1 dataset
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 153 bp overlap
GATA2 3 datasets
ChIP ESF GSE108408.GATA2.ESF 150 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P1 124 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 251 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 216 bp overlap
HAND2 1 dataset
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
IRF3 1 dataset
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
IRF7 1 dataset
Motif DE_12h DE_12h-IRF7_MA0772.2 13 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
JUND 2 datasets
ChIP SK-N-SH ENCFF551NEQ 90 bp overlap
ChIP SK-N-SH ENCFF971JKN 88 bp overlap
MED1 7 datasets
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 124 bp overlap
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 124 bp overlap
ChIP hMSC-TERT4_osteoblast-4H GSE113253.MED1.hMSC-TERT4_osteoblast-4H 163 bp overlap
ChIP hMSC-TERT4_osteoblast-D1 GSE113253.MED1.hMSC-TERT4_osteoblast-D1 103 bp overlap
ChIP hMSC-TERT4_osteoblast-D3 GSE113253.MED1.hMSC-TERT4_osteoblast-D3 165 bp overlap
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 176 bp overlap
ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 188 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 264 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 264 bp overlap
ChIP hESC GSE18292.NANOG.hESC 123 bp overlap
Nfat5 1 dataset
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
PAX7 1 dataset
ChIP H9_DOX GSE98976.PAX7.H9_DOX 175 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 91 bp overlap
PHIP 1 dataset
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 75 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 152 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 184 bp overlap
RAD21 1 dataset
ChIP HAP1 GSE152721.RAD21.HAP1 167 bp overlap
Rarb 1 dataset
Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 100 bp overlap
SMARCA2 4 datasets
ChIP NPC_AM GSE122631.SMARCA2.NPC_AM 264 bp overlap
ChIP NPC_K755R-pos_ab GSE122631.SMARCA2.NPC_K755R-pos_ab 52 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 124 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 264 bp overlap
SMARCA4 6 datasets
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 66 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 264 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 264 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 184 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 248 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 206 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 193 bp overlap
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 123 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 180 bp overlap
SUZ12 1 dataset
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 159 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 203 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 137 bp overlap
TCF7L1 1 dataset
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
TEAD4 2 datasets
ChIP SK-N-SH ENCFF754TJT 212 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 50 bp overlap
ZIM3 1 dataset
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
ZNF418 1 dataset
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
ZNF558 1 dataset
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
ZNF677 1 dataset
Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap