Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

48 transcription factors

ATF2 4 datasets

ChIP H1 ENCFF295GZO 571 bp overlap

ChIP WA01 ENCSR000BQU.ATF2.WA01 169 bp overlap

ChIP WA01 ENCSR000BQU.ATF2.WA01 147 bp overlap

ChIP WA01 ENCSR000BQU.ATF2.WA01 148 bp overlap

BRD3 1 dataset

ChIP H-1_DE GSE126661.BRD3.H-1_DE 351 bp overlap

CHD1 3 datasets

ChIP H1 ENCFF998XEK 257 bp overlap

ChIP WA01 ENCSR000AQK.CHD1.WA01 233 bp overlap

ChIP WA01 ENCSR000AQK.CHD1.WA01 86 bp overlap

CHD7 1 dataset

ChIP WA01 ENCSR000AVA.CHD7.WA01 187 bp overlap

CREB1 4 datasets

ChIP GM23338 ENCFF432ZEW 87 bp overlap

ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 308 bp overlap

ChIP H1 ENCFF955PMP 321 bp overlap

ChIP WA01 ENCSR000BSN.CREB1.WA01 207 bp overlap

CTCF 1 dataset

ChIP glioblastoma_GBM3565 GSE139416.CTCF.glioblastoma_GBM3565 277 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF844FIP 370 bp overlap

EOMES 2 datasets

ChIP hESC GSE26097.EOMES.hESC 318 bp overlap

ChIP hESC GSE26097.EOMES.hESC 329 bp overlap

EZH2 1 dataset

ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 82 bp overlap

FOXA2 1 dataset

ChIP DE DE-FOXA2-1 624 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 319 bp overlap

ChIP DE DE-GATA4-2 386 bp overlap

GATA6 7 datasets

ChIP DE DE-GATA6-1 284 bp overlap

ChIP DE DE-GATA6-2 552 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 691 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 709 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 365 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 431 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 620 bp overlap

ISL2 1 dataset

Motif DE_24h DE_24h-ISL2_MA0914.2 6 bp overlap

JUN 6 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 832 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 610 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 755 bp overlap

ChIP DE_D2 S54-DE-d2-JUN-exp2 544 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 350 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 883 bp overlap

MED1 1 dataset

ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 829 bp overlap

MYB 1 dataset

ChIP CD4_Th1 GSE72266.MYB.CD4_Th1 148 bp overlap

NANOG 7 datasets

ChIP GM23338 ENCFF065NZG 311 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 117 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 952 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 671 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 681 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 610 bp overlap

ChIP hESC GSE18292.NANOG.hESC 95 bp overlap

NEUROD1 1 dataset

ChIP D283-Med GSE92582.NEUROD1.D283-Med 264 bp overlap

Nr2e1 1 dataset

Motif DE_24h DE_24h-Nr2e1_MA0676.1 9 bp overlap

POU5F1 4 datasets

ChIP DE_D1 DED1-OCT4_Batch_II 636 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 591 bp overlap

ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 207 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 416 bp overlap

RAD21 1 dataset

ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 138 bp overlap

REST 1 dataset

ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 129 bp overlap

SALL3 1 dataset

ChIP hiPSC GSE104863.SALL3.hiPSC 332 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 296 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 935 bp overlap

SMAD2_3 6 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 905 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 952 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 842 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 353 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 369 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 367 bp overlap

SMARCA4 3 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 409 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 239 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 313 bp overlap

SMARCB1 1 dataset

ChIP hiPSC GSE124903.SMARCB1.hiPSC 238 bp overlap

SMARCC1 4 datasets

ChIP DE_D1 S10-DE-d1-BAF155-exp1 415 bp overlap

ChIP DE_D1 S15-DE-d1-BAF155-exp1 795 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 194 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 238 bp overlap

SMARCE1 1 dataset

ChIP HMLE-Twist-ER_125nM_4OHT GSE96933.SMARCE1.HMLE-Twist-ER_125nM_4OHT 278 bp overlap

SPIC 1 dataset

Motif DE_24h DE_24h-SPIC_MA0687.2 13 bp overlap

STAT1 1 dataset

Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap

STAT3 1 dataset

Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap

Stat2 1 dataset

Motif DE_24h DE_24h-Stat2_MA1623.2 10 bp overlap

Stat4 1 dataset

Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap

Stat5a 1 dataset

Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap

Stat5a::Stat5b 1 dataset

Motif DE_12h DE_12h-Stat5aStat5b_MA0519.2 9 bp overlap

Stat5b 1 dataset

Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 221 bp overlap

TAF7 3 datasets

ChIP H1 ENCFF061XZZ 337 bp overlap

ChIP WA01 ENCSR000BLU.TAF7.WA01 114 bp overlap

TBP 1 dataset

ChIP hESC_2h GSE122298.TBP.hESC_2h 135 bp overlap

TP53 1 dataset

ChIP H9_mesoderm GSE142050.TP53.H9_mesoderm 418 bp overlap

ZBED1 1 dataset

Motif DE_24h DE_24h-ZBED1_MA0749.2 12 bp overlap

ZBTB21 1 dataset

ChIP WTC11 ENCFF677ZYY 401 bp overlap

ZNF175 1 dataset

Motif DE_24h DE_24h-ZNF175_MA2332.1 9 bp overlap

ZNF573 1 dataset

ChIP HEK293T GSE78099.ZNF573.HEK293T 85 bp overlap

ZNF652 1 dataset

Motif DE_24h DE_24h-ZNF652_MA1657.2 9 bp overlap

ZNF707 1 dataset

Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap

ZNF8 1 dataset

Motif DE_12h DE_12h-ZNF8_MA1718.1 20 bp overlap

Gene	Dist. to TSS	Distance	Link type
MIR302CHG	6.3 kb	Proximal	Proximity
MIR302B	6.5 kb	Proximal	Proximity
MIR302C	6.6 kb	Proximal	Proximity
MIR302A	6.8 kb	Proximal	Proximity
MIR302D	6.9 kb	Proximal	Proximity
LARP7	9.4 kb	Proximal	Proximity

Genome Browser