chr4 : 62,277,586 – 62,278,321

735 bp 77 TFs 0 linked genes

This 735 bp open chromatin element has no linked target genes and is bound by 77 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

77 transcription factors

ARNT::HIF1A 1 dataset

Motif DE_36h DE_36h-ARNTHIF1A_MA0259.2 5 bp overlap

BARHL1 1 dataset

Motif DE_36h DE_36h-BARHL1_MA0877.4 6 bp overlap

BARHL2 1 dataset

Motif DE_36h DE_36h-BARHL2_MA0635.2 6 bp overlap

BARX1 1 dataset

Motif DE_36h DE_36h-BARX1_MA0875.2 6 bp overlap

BSX 1 dataset

Motif DE_36h DE_36h-BSX_MA0876.2 6 bp overlap

Bcl11B 1 dataset

Motif DE_36h DE_36h-Bcl11B_MA1989.2 9 bp overlap

CTCF 1 dataset

Motif DE_36h DE_36h-CTCF_MA0139.2 15 bp overlap

DLX1 1 dataset

Motif DE_36h DE_36h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif DE_36h DE_36h-DLX6_MA0882.2 6 bp overlap

Dlx2 1 dataset

Motif DE_36h DE_36h-Dlx2_MA0885.3 8 bp overlap

Dlx3 1 dataset

Motif DE_36h DE_36h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif DE_36h DE_36h-Dlx4_MA0881.2 6 bp overlap

Dlx5 1 dataset

Motif DE_36h DE_36h-Dlx5_MA1476.3 8 bp overlap

EN2 1 dataset

Motif DE_36h DE_36h-EN2_MA0642.3 7 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 244 bp overlap

ERF::FOXO1 1 dataset

Motif DE_36h DE_36h-ERFFOXO1_MA1936.2 12 bp overlap

ETV2 1 dataset

Motif DE_36h DE_36h-ETV2_MA0762.2 9 bp overlap

ETV2::FOXI1 1 dataset

Motif DE_36h DE_36h-ETV2FOXI1_MA1942.2 11 bp overlap

ETV6 1 dataset

Motif DE_36h DE_36h-ETV6_MA0645.2 9 bp overlap

ETV7 1 dataset

Motif DE_36h DE_36h-ETV7_MA1708.2 9 bp overlap

FLI1::FOXI1 1 dataset

Motif DE_36h DE_36h-FLI1FOXI1_MA1950.2 11 bp overlap

FOXA2 1 dataset

ChIP DE DE-FOXA2-1 373 bp overlap

FOXO1::ELK1 1 dataset

Motif DE_36h DE_36h-FOXO1ELK1_MA1954.2 13 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 521 bp overlap

ChIP DE DE-GATA4-2 506 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 486 bp overlap

ChIP DE DE-GATA6-2 374 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 406 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 505 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 410 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 502 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 515 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 484 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 466 bp overlap

GBX1 1 dataset

Motif DE_36h DE_36h-GBX1_MA0889.2 7 bp overlap

GBX2 1 dataset

Motif DE_36h DE_36h-GBX2_MA0890.2 6 bp overlap

HESX1 1 dataset

Motif DE_36h DE_36h-HESX1_MA0894.2 6 bp overlap

HOXA7 1 dataset

Motif DE_36h DE_36h-HOXA7_MA1498.3 6 bp overlap

IKZF1 1 dataset

Motif DE_36h DE_36h-IKZF1_MA1508.2 8 bp overlap

IRF2 1 dataset

Motif DE_36h DE_36h-IRF2_MA0051.2 16 bp overlap

IRF3 1 dataset

Motif DE_36h DE_36h-IRF3_MA1418.2 17 bp overlap

IRF4 1 dataset

Motif DE_36h DE_36h-IRF4_MA1419.2 14 bp overlap

IRF5 1 dataset

Motif DE_36h DE_36h-IRF5_MA1420.1 14 bp overlap

IRF8 1 dataset

Motif DE_36h DE_36h-IRF8_MA0652.2 13 bp overlap

Irf1 1 dataset

Motif DE_36h DE_36h-Irf1_MA0050.4 11 bp overlap

KLF10 1 dataset

Motif DE_36h DE_36h-KLF10_MA1511.2 9 bp overlap

KLF14 1 dataset

Motif DE_36h DE_36h-KLF14_MA0740.2 9 bp overlap

KLF15 1 dataset

Motif DE_36h DE_36h-KLF15_MA1513.2 8 bp overlap

LBX1 1 dataset

Motif DE_36h DE_36h-LBX1_MA0618.2 7 bp overlap

LBX2 1 dataset

Motif DE_36h DE_36h-LBX2_MA0699.2 6 bp overlap

LHX2 1 dataset

Motif DE_36h DE_36h-LHX2_MA0700.3 6 bp overlap

LHX9 1 dataset

Motif DE_36h DE_36h-LHX9_MA0701.3 7 bp overlap

Lhx1 1 dataset

Motif DE_36h DE_36h-Lhx1_MA1518.3 10 bp overlap

MED1 1 dataset

ChIP LNCaP_Veh GSE125245.MED1.LNCaP_Veh 154 bp overlap

MEIS1 2 datasets

Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap

MEIS2 1 dataset

Motif DE_36h DE_36h-MEIS2_MA0774.1 8 bp overlap

MEIS3 1 dataset

Motif DE_36h DE_36h-MEIS3_MA0775.2 7 bp overlap

MSX1 1 dataset

Motif DE_36h DE_36h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif DE_36h DE_36h-MSX2_MA0708.3 6 bp overlap

Mecom 1 dataset

Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap

Msx3 1 dataset

Motif DE_36h DE_36h-Msx3_MA0709.2 6 bp overlap

NFIA 1 dataset

Motif DE_36h DE_36h-NFIA_MA0670.2 6 bp overlap

NFIX 1 dataset

Motif DE_36h DE_36h-NFIX_MA0671.2 6 bp overlap

Nfat5 1 dataset

Motif DE_36h DE_36h-Nfat5_MA0606.3 8 bp overlap

Nobox 1 dataset

Motif DE_36h DE_36h-Nobox_MA0125.2 6 bp overlap

PRRX2 1 dataset

Motif DE_36h DE_36h-PRRX2_MA0075.4 7 bp overlap

RARB 1 dataset

Motif DE_36h DE_36h-RARB_MA1552.2 13 bp overlap

RARG 1 dataset

Motif DE_36h DE_36h-RARG_MA1553.2 13 bp overlap

RAX 1 dataset

Motif DE_36h DE_36h-RAX_MA0718.2 6 bp overlap

RELA 1 dataset

Motif DE_36h DE_36h-RELA_MA0107.1 10 bp overlap

RXRB 1 dataset

Motif DE_36h DE_36h-RXRB_MA1555.1 14 bp overlap

RXRG 1 dataset

Motif DE_36h DE_36h-RXRG_MA1556.1 14 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 274 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 286 bp overlap

SP1 1 dataset

Motif DE_36h DE_36h-SP1_MA0079.5 9 bp overlap

SP2 1 dataset

Motif DE_36h DE_36h-SP2_MA0516.3 9 bp overlap

SPI1 1 dataset

ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 166 bp overlap

SPIB 1 dataset

Motif DE_36h DE_36h-SPIB_MA0081.3 13 bp overlap

Spi1 1 dataset

Motif DE_36h DE_36h-Spi1_MA0080.7 13 bp overlap

Stat4 1 dataset

Motif DE_36h DE_36h-Stat4_MA0518.2 10 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 236 bp overlap

Vdr 1 dataset

Motif DE_36h DE_36h-Vdr_MA0693.4 7 bp overlap

ZKSCAN5 2 datasets

Motif DE_36h DE_36h-ZKSCAN5_MA1652.2 9 bp overlap

ZNF16 1 dataset

Motif DE_36h DE_36h-ZNF16_MA1654.2 21 bp overlap

ZNF680 1 dataset

Motif DE_36h DE_36h-ZNF680_MA1729.2 11 bp overlap

ZNF707 1 dataset

Motif DE_36h DE_36h-ZNF707_MA1715.1 15 bp overlap

Zfp961 1 dataset

Motif DE_36h DE_36h-Zfp961_MA2126.1 8 bp overlap