chr4 : 24,917,161 24,917,569
408 bp 39 TFs 1 linked gene
This 408 bp open chromatin element is linked to CCDC149 and is bound by 39 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CCDC149 4.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:24,912,161 – 24,922,569
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
39 transcription factors
Source
Cell type
AR 1 dataset
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 169 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 408 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 342 bp overlap
BRD4 3 datasets
ChIP 402-91 GSE111253.BRD4.402-91 256 bp overlap
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 223 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 326 bp overlap
CLOCK 1 dataset
ChIP U2OS GSE44236.CLOCK.U2OS 179 bp overlap
CREB1 2 datasets
ChIP H1 ENCFF955PMP 321 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 130 bp overlap
CTCF 2 datasets
ChIP U-937 ERP008568.CTCF.U-937 258 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 178 bp overlap
E2F1 1 dataset
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 184 bp overlap
EGR1 2 datasets
ChIP K-562 ENCSR211LTF.EGR1.K-562 197 bp overlap
ChIP K-562 ENCSR024CNP.EGR1.K-562 111 bp overlap
ESR1 2 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 254 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 224 bp overlap
FLI1 2 datasets
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 195 bp overlap
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 202 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 344 bp overlap
GATA6 7 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 261 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 133 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 408 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 211 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 408 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 182 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 166 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 309 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 257 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 408 bp overlap
MYB 2 datasets
ChIP THP-1 GSE90769.MYB.THP-1 157 bp overlap
ChIP THP-1_OG86 GSE90769.MYB.THP-1_OG86 193 bp overlap
NANOG 5 datasets
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 279 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 135 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 393 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 236 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 303 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 408 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 96 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 98 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 305 bp overlap
PKNOX1 3 datasets
ChIP HEK293T ENCFF174WDB 339 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 267 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 327 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 187 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 274 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 323 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 224 bp overlap
SMAD3 1 dataset
ChIP hESC GSE29422.SMAD3.hESC 168 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 288 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 255 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 180 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 196 bp overlap
TCF7 1 dataset
ChIP breast-organoid_BRCA2-mut GSE113909.TCF7.breast-organoid_BRCA2-mut 375 bp overlap
TRIM24 2 datasets
ChIP MOLM-13_IACS-9571 GSE100571.TRIM24.MOLM-13_IACS-9571 212 bp overlap
ChIP MOLM-13_dTRIM24 GSE100571.TRIM24.MOLM-13_dTRIM24 175 bp overlap
ZFP57 1 dataset
ChIP hESC GSE115387.ZFP57.hESC 312 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 276 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR117WTM.ZNF24.K-562 124 bp overlap