chr4 : 15,482,913 15,483,330
417 bp 43 TFs 1 linked gene
This 417 bp open chromatin element is linked to CC2D2A and is bound by 43 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CC2D2A 3.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:15,477,913 – 15,488,330
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
43 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 278 bp overlap
ChIP K562 ENCFF938UXQ 344 bp overlap
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 145 bp overlap
BRD4 2 datasets
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 93 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 248 bp overlap
CTBP1 2 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 405 bp overlap
ChIP K562 ENCFF403WPG 226 bp overlap
EHMT2 1 dataset
ChIP K-562 ENCSR175EOM.EHMT2.K-562 221 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 333 bp overlap
ChIP DE DE-FOXA2-2 296 bp overlap
FOXK2 1 dataset
ChIP K-562 ENCSR302AWT.FOXK2.K-562 221 bp overlap
GATA1 3 datasets
ChIP K-562 GSE107726.GATA1.K-562 262 bp overlap
ChIP K-562 ENCSR000EWM.GATA1.K-562 131 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 137 bp overlap
GATA2 1 dataset
ChIP K-562 ENCSR000EWG.GATA2.K-562 116 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 299 bp overlap
ChIP DE DE-GATA4-2 304 bp overlap
ChIP foregut GSE117136.GATA4.foregut 287 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 183 bp overlap
ChIP DE DE-GATA6-2 234 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 384 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 395 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 273 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 254 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 417 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 410 bp overlap
ChIP foregut GSE117136.GATA6.foregut 354 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 354 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 266 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 252 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 281 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 239 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 206 bp overlap
ChIP K-562_dilution-6-100 GSE140325.HDAC1.K-562_dilution-6-100 72 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR075HTM.HDAC2.K-562 373 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 191 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 254 bp overlap
ChIP K562 ENCFF348IBL 320 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 127 bp overlap
KDM1A 2 datasets
ChIP K-562 GSE117944.KDM1A.K-562 274 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 209 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 114 bp overlap
MAX 1 dataset
ChIP K-562 ENCSR000EFV.MAX.K-562 193 bp overlap
MECOM 1 dataset
ChIP K562 ENCFF773RGL 274 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 237 bp overlap
ChIP K562 ENCFF320GSD 280 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR914NEI.MTA3.K-562 344 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 130 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 411 bp overlap
NEUROG2 3 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 221 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 226 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 197 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 272 bp overlap
ChIP K562 ENCFF286KMN 318 bp overlap
PKNOX1 2 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 304 bp overlap
ChIP K562 ENCFF236IUS 356 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 142 bp overlap
RAD21 1 dataset
ChIP K562 ENCFF634XYR 277 bp overlap
RBM39 1 dataset
ChIP K-562 ENCSR764OXF.RBM39.K-562 149 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 287 bp overlap
RFX1 4 datasets
ChIP K-562 ENCSR968GIB.RFX1.K-562 127 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 135 bp overlap
ChIP K562 ENCFF421AVO 201 bp overlap
ChIP K562 ENCFF809XVG 219 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 279 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 342 bp overlap
SPI1 3 datasets
ChIP K-562 ENCSR000BGW.SPI1.K-562 218 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 159 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 158 bp overlap
TAL1 1 dataset
ChIP K-562 ENCSR000EHB.TAL1.K-562 184 bp overlap
TBP 1 dataset
ChIP K-562 GSE55306.TBP.K-562 194 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 235 bp overlap
ZSCAN22 1 dataset
ChIP HEK293 GSE76494.ZSCAN22.HEK293 232 bp overlap