chr3 : 169,666,181 169,666,315
134 bp 28 TFs 1 linked gene
This 134 bp open chromatin element is linked to MECOM and is bound by 28 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
MECOM 2.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:169,661,181 – 169,671,315
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
28 transcription factors
Source
Cell type
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 134 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 134 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 134 bp overlap
BMPR1A 1 dataset
ChIP HUVEC-C GSE60156.BMPR1A.HUVEC-C 134 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 134 bp overlap
BRD4 2 datasets
ChIP HUVEC-C_TNF GSE53998.BRD4.HUVEC-C_TNF 83 bp overlap
ChIP OVCAR-3_DMSO GSE77568.BRD4.OVCAR-3_DMSO 94 bp overlap
CBX2 1 dataset
ChIP HepG2 ENCFF838BNI 134 bp overlap
CBX7 1 dataset
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 109 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 134 bp overlap
CXXC5 1 dataset
ChIP prostate-cancer GSE136128.CXXC5.prostate-cancer 134 bp overlap
EZH2 8 datasets
ChIP GM23248 ENCFF506FWX 134 bp overlap
ChIP H1 ENCFF232NZA 134 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 134 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 94 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 134 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 105 bp overlap
ChIP neural ENCSR511CUH.EZH2.neural 106 bp overlap
ChIP neural progenitor cell ENCFF472NFV 134 bp overlap
FERD3L 1 dataset
Motif DE_12h DE_12h-FERD3L_MA1485.1 14 bp overlap
GATA6 3 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 78 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 134 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 134 bp overlap
JARID2 2 datasets
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 134 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 134 bp overlap
MAX 1 dataset
ChIP Ishikawa ENCFF064TDQ 65 bp overlap
MTF2 1 dataset
ChIP DU145_CTR GSE135623.MTF2.DU145_CTR 134 bp overlap
MYCN 1 dataset
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 60 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 121 bp overlap
RAD21 1 dataset
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 134 bp overlap
RELA 2 datasets
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 57 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 134 bp overlap
RING1 1 dataset
ChIP SYO-1_shCt GSE139053.RING1.SYO-1_shCt 109 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 134 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 134 bp overlap
SMARCC1 3 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 126 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 75 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 134 bp overlap
SS18 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 134 bp overlap
SUZ12 5 datasets
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 134 bp overlap
ChIP H1 ENCFF881NFR 134 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 134 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 134 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 134 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 124 bp overlap
TCF7L2 1 dataset
ChIP CD34_PROG_BIO GSE29194.TCF7L2.CD34_PROG_BIO 67 bp overlap
ZBTB7A 1 dataset
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 134 bp overlap
ZNF202 2 datasets
ChIP HEK293 ENCFF574FZA 57 bp overlap
ChIP HEK293 ENCSR996FYT.ZNF202.HEK293 134 bp overlap