Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

40 transcription factors

CUX1 2 datasets

ChIP MCF-7 ENCFF779ATB 333 bp overlap

ChIP MCF-7 ENCSR017CEO.CUX1.MCF-7 251 bp overlap

DMRT3 1 dataset

Motif DE_36h DE_36h-DMRT3_MA0610.2 7 bp overlap

DUX4 1 dataset

ChIP WA01 GSE94322.DUX4.WA01 253 bp overlap

EBF3 1 dataset

Motif DE_48h DE_48h-EBF3_MA1637.2 9 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 395 bp overlap

EP300 2 datasets

ChIP neural ENCSR843ZUP.EP300.neural 167 bp overlap

ChIP neural cell ENCFF442QNK 77 bp overlap

Ebf2 1 dataset

Motif DE_48h DE_48h-Ebf2_MA1604.2 9 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 532 bp overlap

ChIP DE DE-FOXA2-2 532 bp overlap

FOXP2 1 dataset

Motif DE_48h DE_48h-FOXP2_MA0593.2 9 bp overlap

GATA2 1 dataset

Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap

GATA4 4 datasets

ChIP DE DE-GATA4-1 529 bp overlap

ChIP DE DE-GATA4-2 532 bp overlap

Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap

ChIP foregut GSE117136.GATA4.foregut 370 bp overlap

GATA6 10 datasets

ChIP DE DE-GATA6-1 520 bp overlap

ChIP DE DE-GATA6-2 532 bp overlap

Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 513 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 524 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 387 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 532 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 520 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 518 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 496 bp overlap

Gata3 1 dataset

Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap

HOXB4 1 dataset

Motif DE_36h DE_36h-HOXB4_MA1499.2 6 bp overlap

HOXC4 1 dataset

Motif DE_36h DE_36h-HOXC4_MA1504.2 6 bp overlap

HOXD4 1 dataset

Motif DE_36h DE_36h-HOXD4_MA1507.2 6 bp overlap

MEIS1 1 dataset

Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap

NKX6-1 1 dataset

Motif DE_36h DE_36h-NKX6-1_MA0674.2 7 bp overlap

NKX6-3 1 dataset

Motif DE_36h DE_36h-NKX6-3_MA1530.2 8 bp overlap

Nfat5 1 dataset

Motif DE_48h DE_48h-Nfat5_MA0606.3 8 bp overlap

POU4F2 1 dataset

Motif DE_36h DE_36h-POU4F2_MA0683.2 15 bp overlap

POU6F1 1 dataset

Motif DE_36h DE_36h-POU6F1_MA1549.2 7 bp overlap

POU6F2 1 dataset

Motif DE_36h DE_36h-POU6F2_MA0793.2 9 bp overlap

PPARG 1 dataset

Motif DE_48h DE_48h-PPARG_MA0066.2 19 bp overlap

RAD21 1 dataset

ChIP neural ENCSR198ZYJ.RAD21.neural 135 bp overlap

REST 2 datasets

ChIP neural ENCSR000BTV.REST.neural 147 bp overlap

ChIP neural cell ENCFF882LXX 212 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 442 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 285 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 432 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 297 bp overlap

SMC3 2 datasets

ChIP neural ENCSR404BPV.SMC3.neural 257 bp overlap

ChIP neural cell ENCFF795YGY 313 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 332 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 333 bp overlap

TEAD4 1 dataset

Motif DE_48h DE_48h-TEAD4_MA0809.3 8 bp overlap

TOP2A 1 dataset

ChIP KG-1_etoposide_VP16 GSE114048.TOP2A.KG-1_etoposide_VP16 90 bp overlap

TRPS1 1 dataset

Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap

ZNF257 1 dataset

Motif DE_48h DE_48h-ZNF257_MA1710.2 10 bp overlap

ZNF317 1 dataset

ChIP HEK293 GSE76494.ZNF317.HEK293 54 bp overlap

ZNF384 1 dataset

Motif DE_48h DE_48h-ZNF384_MA1125.2 8 bp overlap

ZNF418 1 dataset

Motif DE_48h DE_48h-ZNF418_MA1980.1 15 bp overlap

ZNF675 1 dataset

Motif DE_36h DE_36h-ZNF675_MA1714.2 19 bp overlap

ZNF677 1 dataset

Motif DE_48h DE_48h-ZNF677_MA2101.1 12 bp overlap

Genome Browser