chr3 : 27,653,872 27,654,457
585 bp 49 TFs 0 linked genes
This 585 bp open chromatin element has no linked target genes and is bound by 49 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:27,648,872 – 27,659,457
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
49 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 371 bp overlap
ATF3 3 datasets
ChIP H1 ENCFF852GZY 172 bp overlap
ChIP WA01 ENCSR000BKC.ATF3.WA01 136 bp overlap
ChIP WTC11 ENCFF519QFH 250 bp overlap
ATF4 1 dataset
ChIP K-562 ENCSR145TSJ.ATF4.K-562 157 bp overlap
ATF7 2 datasets
ChIP Hep-G2 ENCSR545FXC.ATF7.Hep-G2 161 bp overlap
ChIP HepG2 ENCFF470FKK 244 bp overlap
BCL6B 1 dataset
Motif ES_0h ES_0h-BCL6B_MA0731.1 17 bp overlap
CEBPA 3 datasets
ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 133 bp overlap
ChIP MV4-11 GSE88746.CEBPA.MV4-11 211 bp overlap
ChIP T-47D_siCtrl GSE132649.CEBPA.T-47D_siCtrl 195 bp overlap
CEBPB 9 datasets
ChIP A549 ENCFF235AIY 179 bp overlap
ChIP H1 ENCFF871PTR 107 bp overlap
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 174 bp overlap
ChIP HepG2 ENCFF536NTI 152 bp overlap
ChIP IMR-90 ENCFF468UGY 162 bp overlap
ChIP MCF-7 ENCSR000BSR.CEBPB.MCF-7 113 bp overlap
ChIP MV4-11 GSE88746.CEBPB.MV4-11 212 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 254 bp overlap
ChIP monocyte_IFNg-LPS GSE120943.CEBPB.monocyte_IFNg-LPS 183 bp overlap
CEBPG 1 dataset
ChIP MCF-7 ENCFF155HZI 314 bp overlap
Cebpa 5 datasets
ChIP BLaER1 ENCFF093OYK 274 bp overlap
ChIP BLaER1 ENCFF274GAT 205 bp overlap
ChIP BLaER1 ENCFF364PUR 166 bp overlap
ChIP BLaER1 ENCFF844FIP 243 bp overlap
ChIP BLaER1 ENCFF896HSY 141 bp overlap
DUX4 1 dataset
Motif ES_0h ES_0h-DUX4_MA0468.1 11 bp overlap
FEZF2 1 dataset
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 222 bp overlap
HLF 1 dataset
ChIP HepG2 ENCFF854JLR 170 bp overlap
JUN 2 datasets
ChIP ESC S34-ESC-d0-JUN-exp2 247 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 226 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 145 bp overlap
KLF4 2 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 129 bp overlap
ChIP hiPSC GSE56567.KLF4.hiPSC 171 bp overlap
MAX 2 datasets
ChIP WA01 ENCSR000EUP.MAX.WA01 271 bp overlap
ChIP WTC11 ENCFF223QFY 457 bp overlap
MYC 1 dataset
ChIP H1 ENCFF794ZJT 265 bp overlap
MZF1 1 dataset
Motif ES_0h ES_0h-MZF1_MA0056.3 8 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 240 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 559 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 535 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 163 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 585 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 585 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 585 bp overlap
ChIP hESC GSE18292.NANOG.hESC 137 bp overlap
ChIP hESC GSE18292.NANOG.hESC 134 bp overlap
Nanog 1 dataset
Motif ES_0h ES_0h-Nanog_MA2339.1 7 bp overlap
POU5F1 7 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 131 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 551 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 400 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 585 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 585 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 544 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 148 bp overlap
RARA 1 dataset
Motif ES_0h ES_0h-RARA_MA0729.1 18 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 181 bp overlap
SMARCA4 2 datasets
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 233 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 566 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 283 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 451 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 575 bp overlap
SP5 1 dataset
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
Stat5b 1 dataset
Motif ES_0h ES_0h-Stat5b_MA1625.2 9 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 380 bp overlap
TFAP2A 1 dataset
Motif ES_0h ES_0h-TFAP2A_MA0872.1 13 bp overlap
TFAP2B 1 dataset
Motif ES_0h ES_0h-TFAP2B_MA0813.1 13 bp overlap
TFAP2C 3 datasets
Motif ES_0h ES_0h-TFAP2C_MA0815.1 13 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 585 bp overlap
ChIP WA09 GSE105081.TFAP2C.WA09 210 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 386 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 178 bp overlap
ZBTB24 1 dataset
Motif ES_0h ES_0h-ZBTB24_MA2330.1 10 bp overlap
ZNF135 1 dataset
Motif ES_0h ES_0h-ZNF135_MA1587.1 14 bp overlap
ZNF418 1 dataset
Motif ES_0h ES_0h-ZNF418_MA1980.1 15 bp overlap
ZNF460 1 dataset
Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 164 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 176 bp overlap
ZNF652 1 dataset
Motif ES_0h ES_0h-ZNF652_MA1657.2 9 bp overlap
ZNF680 1 dataset
Motif ES_0h ES_0h-ZNF680_MA1729.2 11 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 99 bp overlap
ZNF770 1 dataset
Motif ES_0h ES_0h-ZNF770_MA2099.1 8 bp overlap
ZNF85 1 dataset
Motif ES_0h ES_0h-ZNF85_MA1720.2 12 bp overlap
Zfp335 1 dataset
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap