Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

47 transcription factors

BRD4 1 dataset

ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 254 bp overlap

Bach1::Mafk 1 dataset

Motif DE_48h DE_48h-Bach1Mafk_MA0591.2 12 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF031ISE 256 bp overlap

Crx 1 dataset

Motif DE_48h DE_48h-Crx_MA0467.3 6 bp overlap

Dmbx1 1 dataset

Motif DE_48h DE_48h-Dmbx1_MA0883.2 10 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 572 bp overlap

ChIP DE DE-FOXA2-2 642 bp overlap

FOXD2 1 dataset

Motif DE_48h DE_48h-FOXD2_MA0847.4 11 bp overlap

FOXE1 1 dataset

Motif DE_48h DE_48h-FOXE1_MA1487.3 12 bp overlap

FOXH1 1 dataset

Motif DE_48h DE_48h-FOXH1_MA0479.2 8 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 675 bp overlap

ChIP DE DE-GATA4-2 647 bp overlap

GATA6 4 datasets

ChIP DE DE-GATA6-1 642 bp overlap

ChIP DE DE-GATA6-2 598 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 376 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 582 bp overlap

GSC 1 dataset

Motif DE_48h DE_48h-GSC_MA0648.2 6 bp overlap

GSC2 1 dataset

Motif DE_48h DE_48h-GSC2_MA0891.2 6 bp overlap

HNF4A 3 datasets

ChIP liver ENCFF354NRH 57 bp overlap

ChIP liver ENCFF449HPV 71 bp overlap

ChIP liver ERP002306.HNF4A.liver 84 bp overlap

Hnf1A 1 dataset

Motif DE_48h DE_48h-Hnf1A_MA1991.2 10 bp overlap

JUN 1 dataset

ChIP DE_D2 S02-DE-d2-JUN-exp1 298 bp overlap

MAF::NFE2 1 dataset

Motif DE_48h DE_48h-MAFNFE2_MA0501.2 11 bp overlap

MAFG::NFE2L1 1 dataset

Motif DE_48h DE_48h-MAFGNFE2L1_MA0089.3 11 bp overlap

MAFK 1 dataset

Motif DE_48h DE_48h-MAFK_MA0496.4 10 bp overlap

MEIS1 1 dataset

Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap

Nfe2l2 1 dataset

Motif DE_48h DE_48h-Nfe2l2_MA0150.3 11 bp overlap

ONECUT1 1 dataset

Motif DE_48h DE_48h-ONECUT1_MA0679.3 9 bp overlap

ONECUT2 1 dataset

Motif DE_48h DE_48h-ONECUT2_MA0756.3 8 bp overlap

OTX1 1 dataset

Motif DE_48h DE_48h-OTX1_MA0711.2 6 bp overlap

PITX1 1 dataset

Motif DE_48h DE_48h-PITX1_MA0682.3 6 bp overlap

PITX3 1 dataset

Motif DE_48h DE_48h-PITX3_MA0714.2 6 bp overlap

RAD21 1 dataset

ChIP liver ENCFF485PAC 380 bp overlap

RELA 1 dataset

Motif DE_48h DE_48h-RELA_MA0107.1 10 bp overlap

RHOXF1 1 dataset

Motif DE_48h DE_48h-RHOXF1_MA0719.2 6 bp overlap

RUNX2 1 dataset

ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 159 bp overlap

RXRA 2 datasets

ChIP liver ENCFF077DAP 212 bp overlap

ChIP liver ENCFF807CIA 92 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 285 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 596 bp overlap

SMAD2_3 4 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 359 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 409 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 675 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 675 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 238 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 623 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 507 bp overlap

SOX9 1 dataset

Motif DE_48h DE_48h-SOX9_MA0077.2 8 bp overlap

SP1 1 dataset

ChIP liver ENCFF597LFJ 205 bp overlap

SPIC 1 dataset

Motif DE_48h DE_48h-SPIC_MA0687.2 13 bp overlap

Sox1 1 dataset

Motif DE_48h DE_48h-Sox1_MA0870.1 15 bp overlap

Sox17 1 dataset

Motif DE_48h DE_48h-Sox17_MA0078.3 10 bp overlap

Sox7 1 dataset

Motif DE_48h DE_48h-Sox7_MA2095.1 10 bp overlap

ZFP42 1 dataset

Motif DE_48h DE_48h-ZFP42_MA1651.2 13 bp overlap

ZNF317 3 datasets

Motif DE_48h DE_48h-ZNF317_MA1593.2 8 bp overlap

ChIP K562 ENCFF896LCF 226 bp overlap

ChIP WTC11 ENCFF537KXI 357 bp overlap

ZNF707 1 dataset

Motif DE_48h DE_48h-ZNF707_MA1715.1 15 bp overlap

ZNF768 1 dataset

Motif DE_48h DE_48h-ZNF768_MA1731.2 9 bp overlap

Gene	Dist. to TSS	Distance	Link type
INO80D-AS1	52.2 kb	Distal	Multiome
INO80D	53.9 kb	Distal	Multiome
NDUFS1	127.1 kb	Distal	Multiome
EEF1B2	127.2 kb	Distal	Multiome
ZDBF2	242.2 kb	Distal	Multiome

Genome Browser