chr2 : 177,478,776 177,479,348
572 bp 41 TFs 4 linked genes
This 572 bp open chromatin element is linked to 4 target genes and is bound by 41 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
AGPS 86.3 kb Distal Multiome
ENSG00000213963 86.4 kb Distal Multiome
NFE2L2 86.4 kb Distal Multiome
HNRNPA3 266.3 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:177,473,776 – 177,484,348
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
41 transcription factors
Source
Cell type
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 153 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 215 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 280 bp overlap
ChIP DE DE-FOXA2-2 345 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 572 bp overlap
ChIP DE DE-GATA4-2 572 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 568 bp overlap
ChIP DE DE-GATA6-2 572 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 498 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 572 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 497 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 443 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 338 bp overlap
KLF1 1 dataset
Motif DE_36h DE_36h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_36h DE_36h-KLF10_MA1511.2 9 bp overlap
KLF14 1 dataset
Motif DE_36h DE_36h-KLF14_MA0740.2 9 bp overlap
KLF2 1 dataset
Motif DE_36h DE_36h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_36h DE_36h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_36h DE_36h-KLF5_MA0599.1 10 bp overlap
MGA 1 dataset
Motif DE_36h DE_36h-MGA_MA0801.1 8 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 239 bp overlap
NCOR2 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.NCOR2.B-cell_GERMINAL_CENTER 164 bp overlap
PATZ1 1 dataset
Motif DE_36h DE_36h-PATZ1_MA1961.2 11 bp overlap
RBM22 2 datasets
ChIP HepG2 ENCFF292RVQ 126 bp overlap
ChIP HepG2 ENCFF561IAJ 436 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D41 GSE139377.RELA.aortic-endothelial-cell_IL1B_D41 183 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 419 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 566 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 385 bp overlap
SOX13 1 dataset
Motif DE_36h DE_36h-SOX13_MA1120.2 7 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 363 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 537 bp overlap
SOX2 1 dataset
Motif DE_36h DE_36h-SOX2_MA0143.5 7 bp overlap
SOX21 1 dataset
Motif DE_36h DE_36h-SOX21_MA0866.1 15 bp overlap
Sox1 1 dataset
Motif DE_36h DE_36h-Sox1_MA0870.1 15 bp overlap
Sox17 1 dataset
Motif DE_36h DE_36h-Sox17_MA0078.3 10 bp overlap
Sox3 1 dataset
Motif DE_36h DE_36h-Sox3_MA0514.3 7 bp overlap
Sox5 1 dataset
Motif DE_36h DE_36h-Sox5_MA0087.3 8 bp overlap
Sox6 1 dataset
Motif DE_36h DE_36h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_36h DE_36h-Sox7_MA2095.1 10 bp overlap
TBR1 1 dataset
Motif DE_36h DE_36h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_36h DE_36h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_36h DE_36h-TBX15_MA0803.1 8 bp overlap
TBX2 1 dataset
Motif DE_36h DE_36h-TBX2_MA0688.2 9 bp overlap
TBX4 1 dataset
Motif DE_36h DE_36h-TBX4_MA0806.1 8 bp overlap
TBX5 1 dataset
Motif DE_36h DE_36h-TBX5_MA0807.1 8 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 169 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 236 bp overlap