chr2 : 165,707,108 – 165,707,504

396 bp 49 TFs 1 linked gene

This 396 bp open chromatin element is linked to ENSG00000293576 and is bound by 49 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
ENSG00000293576		8.4 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

49 transcription factors

BRD3 1 dataset

ChIP K-562_IBET151_50nM GSE120715.BRD3.K-562_IBET151_50nM 141 bp overlap

EP300 1 dataset

ChIP hESC GSE17917.EP300.hESC 128 bp overlap

FOXA2 1 dataset

Motif DE_12h DE_12h-FOXA2_MA0047.4 8 bp overlap

FOXC1 1 dataset

Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap

FOXC2 1 dataset

Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap

FOXE1 1 dataset

Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap

FOXG1 1 dataset

Motif DE_12h DE_12h-FOXG1_MA0613.1 8 bp overlap

FOXK1 1 dataset

Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap

FOXK2 1 dataset

Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap

FOXL1 1 dataset

Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap

FOXN3 1 dataset

Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap

FOXO4 1 dataset

Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap

FOXO6 1 dataset

Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap

FOXP2 1 dataset

Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap

FOXP3 1 dataset

Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap

FOXS1 1 dataset

Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap

Foxf1 1 dataset

Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap

Foxj2 1 dataset

Motif DE_12h DE_12h-Foxj2_MA0614.1 8 bp overlap

Foxj3 1 dataset

Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap

Foxl2 1 dataset

Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap

Foxo1 1 dataset

Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap

Foxo3 1 dataset

Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap

Foxq1 1 dataset

Motif DE_12h DE_12h-Foxq1_MA0040.2 10 bp overlap

GATA6 6 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 396 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 313 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 240 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 83 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 396 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 396 bp overlap

JUN 3 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 151 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 396 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 255 bp overlap

KLF4 3 datasets

ChIP WA09 GSE105028.KLF4.WA09 172 bp overlap

ChIP WA09_heat-shock GSE105028.KLF4.WA09_heat-shock 170 bp overlap

ChIP hiPSC GSE56567.KLF4.hiPSC 179 bp overlap

NANOG 8 datasets

ChIP GM23338 ENCFF065NZG 201 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 186 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 396 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 396 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 396 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 396 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 396 bp overlap

ChIP hESC GSE18292.NANOG.hESC 185 bp overlap

ONECUT1 1 dataset

Motif DE_12h DE_12h-ONECUT1_MA0679.3 9 bp overlap

ONECUT2 1 dataset

Motif DE_12h DE_12h-ONECUT2_MA0756.3 8 bp overlap

OTX2 1 dataset

ChIP WTC11 ENCFF634NAO 150 bp overlap

POU2F3 1 dataset

ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 128 bp overlap

POU5F1 4 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 293 bp overlap

ChIP WA09 GSE105028.POU5F1.WA09 95 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 144 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 396 bp overlap

RBPJ 1 dataset

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 278 bp overlap

SMARCA4 1 dataset

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 283 bp overlap

SMARCC1 2 datasets

ChIP DE_D1 S15-DE-d1-BAF155-exp1 216 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 191 bp overlap

SOX2 2 datasets

ChIP hESC GSE18292.SOX2.hESC 130 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 273 bp overlap

Six3 1 dataset

Motif DE_12h DE_12h-Six3_MA0631.2 11 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 224 bp overlap

TP53 1 dataset

ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 383 bp overlap

Yy1 1 dataset

Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap

ZKSCAN3 1 dataset

Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap

ZNF157 1 dataset

Motif DE_12h DE_12h-ZNF157_MA2331.1 21 bp overlap

ZNF207 1 dataset

ChIP WA09 GSE118632.ZNF207.WA09 251 bp overlap

ZNF24 1 dataset

Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap

ZNF283 1 dataset

ChIP HEK293T GSE78099.ZNF283.HEK293T 148 bp overlap

ZNF558 1 dataset

Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap

ZNF675 1 dataset

Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap

ZNF75D 1 dataset

Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap