chr2 : 145,806,209 – 145,806,887
678 bp 38 TFs 0 linked genes
This 678 bp open chromatin element has no linked target genes and is bound by 38 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:145,801,209 – 145,811,887
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
38 transcription factors
Source
Cell type
AR 28 datasets
ChIP DUCAP_ANDROGEN GSE70679.AR.DUCAP_ANDROGEN 203 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 194 bp overlap
ChIP LNCaP_Talen_DHT GSE89938.AR.LNCaP_Talen_DHT 192 bp overlap
ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 112 bp overlap
ChIP MDA-MB-453_R1881_SICTR GSE70161.AR.MDA-MB-453_R1881_SICTR 135 bp overlap
ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 105 bp overlap
ChIP VCaP GSE32892.AR.VCaP 133 bp overlap
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 274 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 296 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 480 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 227 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 394 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 329 bp overlap
ChIP VCaP_DHTTHZ1 GSE125245.AR.VCaP_DHTTHZ1 164 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 134 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 289 bp overlap
ChIP VCaP_R1881_10C26 GSE32892.AR.VCaP_R1881_10C26 191 bp overlap
ChIP VCaP_R1881_1C26 GSE32892.AR.VCaP_R1881_1C26 127 bp overlap
ChIP VCaP_R1881_1C30 GSE32892.AR.VCaP_R1881_1C30 140 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 282 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 305 bp overlap
ChIP VCaP_SH1_DHT GSE79128.AR.VCaP_SH1_DHT 287 bp overlap
ChIP VCaP_SH2_R1881 GSE79128.AR.VCaP_SH2_R1881 291 bp overlap
ChIP VCaP_shCt GSE110655.AR.VCaP_shCt 183 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 238 bp overlap
ChIP prostate-cancer GSE136128.AR.prostate-cancer 182 bp overlap
ChIP prostate-cancer_PDX_189-4 GSE130408.AR.prostate-cancer_PDX_189-4 249 bp overlap
ChIP prostate-cancer_shCXXC5 GSE136128.AR.prostate-cancer_shCXXC5 160 bp overlap
ARID1A 1 dataset
ChIP NGP GSE134626.ARID1A.NGP 448 bp overlap
BAF155 2 datasets
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 186 bp overlap
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 248 bp overlap
BCOR 1 dataset
ChIP VCaP_EtOH GSE122572.BCOR.VCaP_EtOH 167 bp overlap
BRD4 1 dataset
ChIP SGBS GSE64233.BRD4.SGBS 268 bp overlap
DPRX 1 dataset
Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap
DUX4 1 dataset
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Dux 1 dataset
Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 147 bp overlap
ERG 4 datasets
ChIP Jurkat GSE49091.ERG.Jurkat 133 bp overlap
ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 128 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 227 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 264 bp overlap
FOXA1 10 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 285 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 231 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 229 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 160 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 94 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 70 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 322 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 202 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 346 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 168 bp overlap
FOXA2 5 datasets
ChIP DE DE-FOXA2-1 678 bp overlap
ChIP DE DE-FOXA2-2 678 bp overlap
ChIP HepG2 ENCFF533COJ 249 bp overlap
ChIP KerCT GSE90454.FOXA2.KerCT 291 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 353 bp overlap
GABPA 1 dataset
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 208 bp overlap
GATA2 4 datasets
ChIP K562 ENCFF830LLA 472 bp overlap
ChIP K562 ENCFF830LLA 273 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 262 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 228 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 641 bp overlap
ChIP DE DE-GATA4-2 678 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 603 bp overlap
ChIP foregut GSE117136.GATA4.foregut 678 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 678 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 678 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 677 bp overlap
ChIP DE DE-GATA6-2 678 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 571 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 678 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 567 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 635 bp overlap
ChIP foregut GSE117136.GATA6.foregut 678 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 667 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 678 bp overlap
GRHL2 1 dataset
ChIP LNCaP GSE80256.GRHL2.LNCaP 207 bp overlap
HDAC2 1 dataset
ChIP VCaP_DHAT_2H GSE28950.HDAC2.VCaP_DHAT_2H 174 bp overlap
HOXB13 2 datasets
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 152 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 174 bp overlap
MED1 1 dataset
ChIP SGBS GSE64233.MED1.SGBS 305 bp overlap
MYCN 1 dataset
ChIP CHP-134 GSE129588.MYCN.CHP-134 227 bp overlap
Mecom 1 dataset
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
NR2C2 1 dataset
Motif DE_60h DE_60h-NR2C2_MA0504.2 14 bp overlap
NR3C1 6 datasets
ChIP LNCaP_1F5 GSE30623.NR3C1.LNCaP_1F5 141 bp overlap
ChIP LNCaP_1F5_SIFOXA1 GSE30623.NR3C1.LNCaP_1F5_SIFOXA1 128 bp overlap
ChIP MCF-7_E2_Dex GSE81510.NR3C1.MCF-7_E2_Dex 247 bp overlap
ChIP MCF-7_ICI_Dex GSE81510.NR3C1.MCF-7_ICI_Dex 222 bp overlap
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 195 bp overlap
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 330 bp overlap
ONECUT1 3 datasets
ChIP H9 ERP004206.ONECUT1.H9 196 bp overlap
ChIP HepG2 ENCFF243FIR 293 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 356 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 187 bp overlap
PGR 6 datasets
ChIP AB32 GSE31129.PGR.AB32 300 bp overlap
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 197 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 267 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 256 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 188 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 273 bp overlap
PHOX2A 1 dataset
Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 177 bp overlap
PPARA::RXRA 1 dataset
Motif DE_60h DE_60h-PPARARXRA_MA1148.2 17 bp overlap
Pparg::Rxra 1 dataset
Motif DE_60h DE_60h-PpargRxra_MA0065.3 13 bp overlap
RELA 2 datasets
ChIP SGBS GSE64233.RELA.SGBS 306 bp overlap
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 146 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 501 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 243 bp overlap
SMARCA4 2 datasets
ChIP NGP GSE134626.SMARCA4.NGP 358 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 187 bp overlap
TLE3 1 dataset
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 247 bp overlap
ZNF652 2 datasets
Motif DE_60h DE_60h-ZNF652_MA1657.2 9 bp overlap
ChIP Hep-G2 ENCSR502GAX.ZNF652.Hep-G2 160 bp overlap
ZNF675 1 dataset
Motif DE_60h DE_60h-ZNF675_MA1714.2 19 bp overlap
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