chr1 : 29,356,766 – 29,356,959
193 bp 44 TFs 0 linked genes
This 193 bp open chromatin element has no linked target genes and is bound by 44 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:29,351,766 – 29,361,959
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
44 transcription factors
Source
Cell type
AHR 1 dataset
ChIP GM01310_DMSO GSE116632.AHR.GM01310_DMSO 114 bp overlap
BRD4 1 dataset
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 183 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 193 bp overlap
CREB1 2 datasets
ChIP LNCaP-abl_SHCTR GSE63034.CREB1.LNCaP-abl_SHCTR 92 bp overlap
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 193 bp overlap
E2F6 3 datasets
ChIP H1 ENCFF785DWK 193 bp overlap
ChIP K562 ENCFF136LTS 193 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 115 bp overlap
EGR1 2 datasets
ChIP K-562 ENCSR000BNE.EGR1.K-562 163 bp overlap
ChIP K562 ENCFF006PJY 193 bp overlap
ERG 1 dataset
ChIP MCF-7 GSE23730.ERG.MCF-7 171 bp overlap
ESR1 1 dataset
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 120 bp overlap
EZH2 3 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 193 bp overlap
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 193 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 193 bp overlap
FOS 1 dataset
ChIP K-562 ENCSR000FAI.FOS.K-562 104 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 154 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 158 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 130 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 193 bp overlap
IRF1 1 dataset
ChIP K-562 ENCSR000EGT.IRF1.K-562 176 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 193 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 105 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 193 bp overlap
MED1 1 dataset
ChIP K-562 GSE97661.MED1.K-562 140 bp overlap
NFKB1 2 datasets
ChIP HEK293T GSE129618.NFKB1.HEK293T 184 bp overlap
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 113 bp overlap
NFYA 1 dataset
ChIP K-562 GSE26439.NFYA.K-562 107 bp overlap
NFYB 7 datasets
ChIP GM12878 ENCFF474DNH 135 bp overlap
ChIP Hep-G2 ENCSR935GZV.NFYB.Hep-G2 188 bp overlap
ChIP HepG2 ENCFF174VYX 193 bp overlap
ChIP K-562 ENCSR000EGQ.NFYB.K-562 193 bp overlap
ChIP K-562 GSE26439.NFYB.K-562 177 bp overlap
ChIP K562 ENCFF709RXX 97 bp overlap
ChIP WTC11 ENCFF751ZTQ 193 bp overlap
NFYC 1 dataset
ChIP Hep-G2 ENCSR569ARC.NFYC.Hep-G2 156 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 178 bp overlap
NRF1 16 datasets
ChIP HCC1954 GSE67867.NRF1.HCC1954 175 bp overlap
ChIP Hep-G2 ENCSR853ADA.NRF1.Hep-G2 150 bp overlap
ChIP K-562 ENCSR998AJK.NRF1.K-562 193 bp overlap
ChIP K-562 ENCSR494TDU.NRF1.K-562 193 bp overlap
ChIP K-562 ENCSR837EYC.NRF1.K-562 193 bp overlap
ChIP K-562 ENCSR000EHH.NRF1.K-562 115 bp overlap
ChIP K-562_Ab_R157-1-3D4 GSE97661.NRF1.K-562_Ab_R157-1-3D4 193 bp overlap
ChIP K-562_Ab_R157-1-3H1 GSE97661.NRF1.K-562_Ab_R157-1-3H1 146 bp overlap
ChIP K-562_Ab_R157-1-3H3 GSE97661.NRF1.K-562_Ab_R157-1-3H3 193 bp overlap
ChIP K562 ENCFF130SGK 192 bp overlap
ChIP K562 ENCFF689EWI 193 bp overlap
ChIP K562 ENCFF791UHF 193 bp overlap
ChIP MCF-7 ENCFF148IMD 193 bp overlap
ChIP MCF-7 ENCSR135ANT.NRF1.MCF-7 193 bp overlap
ChIP MCF-7_Ab_R157-1-3D4 GSE97661.NRF1.MCF-7_Ab_R157-1-3D4 161 bp overlap
ChIP T-47D_HAEGIN2 GSE59935.NRF1.T-47D_HAEGIN2 184 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 193 bp overlap
PBX1 2 datasets
ChIP A-549 ENCSR637RKG.PBX1.A-549 175 bp overlap
ChIP A549 ENCFF475JCE 193 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 193 bp overlap
ChIP K562 ENCFF286KMN 193 bp overlap
PBX3 2 datasets
ChIP GM12878 ENCFF285BQQ 186 bp overlap
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 140 bp overlap
PKNOX1 8 datasets
ChIP GM12878 ENCFF589FCY 193 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 193 bp overlap
ChIP HEK293T ENCFF174WDB 185 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 193 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 193 bp overlap
ChIP K562 ENCFF236IUS 193 bp overlap
ChIP MCF-7 ENCFF116OCS 193 bp overlap
ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 193 bp overlap
POU2F1 2 datasets
ChIP T-47D GSE148277.POU2F1.T-47D 112 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 192 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 144 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 182 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 168 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 86 bp overlap
SNAI2 1 dataset
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 162 bp overlap
SP1 7 datasets
ChIP H1 ENCFF263FUH 193 bp overlap
ChIP HCT116 ENCFF800LBN 193 bp overlap
ChIP Hep-G2 ENCSR460YAM.SP1.Hep-G2 127 bp overlap
ChIP K-562 ENCSR991ELG.SP1.K-562 193 bp overlap
ChIP K562 ENCFF907BMO 193 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 173 bp overlap
ChIP WTC11 ENCFF688PEU 193 bp overlap
SP2 4 datasets
ChIP HEK293 ENCSR807LQP.SP2.HEK293 193 bp overlap
ChIP HEK293T ERP007114.SP2.HEK293T 193 bp overlap
ChIP K-562 ENCSR000BNL.SP2.K-562 98 bp overlap
ChIP K562 ENCFF891GNQ 173 bp overlap
SP4 4 datasets
ChIP H1 ENCFF473YOB 193 bp overlap
ChIP H1 ENCFF473YOB 147 bp overlap
ChIP HEK293 GSE76494.SP4.HEK293 193 bp overlap
ChIP WA01 ENCSR000BQV.SP4.WA01 188 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 193 bp overlap
STAT3 14 datasets
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 193 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 192 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 154 bp overlap
ChIP MCF-7_jc5848 GSE126004.STAT3.MCF-7_jc5848 158 bp overlap
ChIP T-47D_JC4735 GSE126004.STAT3.T-47D_JC4735 99 bp overlap
ChIP T-47D_JC4741 GSE126004.STAT3.T-47D_JC4741 186 bp overlap
ChIP T-47D_JC4751 GSE126004.STAT3.T-47D_JC4751 193 bp overlap
ChIP T-47D_JC4753 GSE126004.STAT3.T-47D_JC4753 193 bp overlap
ChIP T-47D_JC4755 GSE126004.STAT3.T-47D_JC4755 125 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 170 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 193 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 191 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 189 bp overlap
ChIP WA01 ERP004237.STAT3.WA01 157 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 193 bp overlap
THAP1 1 dataset
ChIP K-562 ENCSR000BNN.THAP1.K-562 93 bp overlap
ZNF143 2 datasets
ChIP MCF-7 GSE76454.ZNF143.MCF-7 171 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 163 bp overlap
ZNF90 1 dataset
ChIP HEK293T GSE78099.ZNF90.HEK293T 185 bp overlap
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