chrX : 151,175,002 – 151,175,213
211 bp 35 TFs 3 linked genes
This 211 bp open chromatin element is linked to GPR50, GPR50-AS1, and ENSG00000269993 and is bound by 35 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
GPR50 1.4 kb Proximal Proximity
GPR50-AS1 2.6 kb Proximal Proximity
ENSG00000269993 7.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:151,170,002 – 151,180,213
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
35 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 211 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 211 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 211 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 191 bp overlap
CBX8 1 dataset
ChIP A-549 ENCSR616MOB.CBX8.A-549 211 bp overlap
CTCF 100 datasets
ChIP A-549 ENCSR000AUF.CTCF.A-549 211 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 211 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 190 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 159 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 175 bp overlap
ChIP A549 ENCFF182TCQ 210 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_36h DE_36h-CTCF_MA0139.2 15 bp overlap
ChIP GM23338 ENCFF531QOI 211 bp overlap
ChIP GM23338 ENCFF772DML 182 bp overlap
ChIP H1 ENCFF230QSV 52 bp overlap
ChIP H1 ENCFF414GZI 188 bp overlap
ChIP H1 ENCFF764RHO 90 bp overlap
ChIP H9 ENCFF152GTF 211 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 211 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 211 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 110 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 169 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 211 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 181 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 209 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 211 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 211 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 211 bp overlap
ChIP HEK293T GSE103651.CTCF.HEK293T 114 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 157 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 181 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 168 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 92 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 206 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 142 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 124 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 137 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 109 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 103 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 123 bp overlap
ChIP K562 ENCFF082GOI 185 bp overlap
ChIP K562 ENCFF400DFR 201 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 153 bp overlap
ChIP Kelly_shB4-res GSE115248.CTCF.Kelly_shB4-res 134 bp overlap
ChIP MCF-7 ENCFF844STM 191 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 104 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 206 bp overlap
ChIP NPC GSE115407.CTCF.NPC 211 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 109 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 169 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 158 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 211 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 211 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 121 bp overlap
ChIP brain ENCFF163BBN 211 bp overlap
ChIP brain ENCFF685VRG 211 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 211 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 211 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 195 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 208 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 211 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 211 bp overlap
ChIP endodermal cell ENCFF471YCZ 211 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 211 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 211 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 211 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 205 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 211 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 198 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 211 bp overlap
ChIP hESC_PRIMED GSE69646.CTCF.hESC_PRIMED 211 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 201 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 112 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 179 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 211 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 200 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 211 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 211 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 211 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 197 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 130 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 211 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 185 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 211 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 208 bp overlap
ChIP keratinocyte ENCFF046PBT 185 bp overlap
ChIP keratinocyte ENCFF291YDC 185 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 211 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 154 bp overlap
ChIP nephron progenitor cell ENCFF455DMI 211 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 211 bp overlap
ChIP neural progenitor cell ENCFF420RBO 211 bp overlap
ChIP neural progenitor cell ENCFF581WPG 211 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 211 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 163 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 211 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d3 191 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 151 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 211 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 185 bp overlap
ChIP retina_AB1-FW14 GSE86981.CTCF.retina_AB1-FW14 211 bp overlap
ChIP retina_AB1-FW16 GSE86981.CTCF.retina_AB1-FW16 211 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 170 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 155 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 104 bp overlap
Ddit3::Cebpa 1 dataset
Motif DE_36h DE_36h-Ddit3Cebpa_MA0019.2 10 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 166 bp overlap
EZH2 17 datasets
ChIP A673 ENCFF790MVL 211 bp overlap
ChIP A673 ENCFF790MVL 211 bp overlap
ChIP A673 ENCFF955JRZ 106 bp overlap
ChIP A673 ENCFF955JRZ 211 bp overlap
ChIP A673 ENCFF955JRZ 211 bp overlap
ChIP GM23338 ENCFF613YON 57 bp overlap
ChIP GM23338 ENCFF613YON 69 bp overlap
ChIP T-REx-293_K27WT GSE118954.EZH2.T-REx-293_K27WT 211 bp overlap
ChIP T-REx-293_K27WT_6h GSE118954.EZH2.T-REx-293_K27WT_6h 211 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 65 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 65 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 211 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 204 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 211 bp overlap
ChIP neural progenitor cell ENCFF018MKA 211 bp overlap
ChIP neural progenitor cell ENCFF018MKA 64 bp overlap
ChIP neural progenitor cell ENCFF472NFV 167 bp overlap
EZH2_phosphoT487 2 datasets
ChIP PC-9 ENCSR702GMW.EZH2_phosphoT487.PC-9 208 bp overlap
ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 211 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 163 bp overlap
JARID2 3 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 60 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 211 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 211 bp overlap
KDM4A 3 datasets
ChIP H1 ENCFF078LED 211 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 55 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 69 bp overlap
POU5F1 3 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 67 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 211 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 186 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 84 bp overlap
PRDM9 1 dataset
Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap
RAD21 27 datasets
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 114 bp overlap
ChIP H1 ENCFF698EWO 179 bp overlap
ChIP H1 ENCFF967OJF 131 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 183 bp overlap
ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 211 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 211 bp overlap
ChIP HEK293_siE1A-TAZ GSE130135.RAD21.HEK293_siE1A-TAZ 211 bp overlap
ChIP HEK293_siYAP GSE130135.RAD21.HEK293_siYAP 211 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 140 bp overlap
ChIP HepG2 ENCFF360ZSW 205 bp overlap
ChIP HepG2 ENCFF906QIS 179 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 183 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 74 bp overlap
ChIP K562 ENCFF169SQI 171 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 211 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 211 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 206 bp overlap
ChIP hiPSC_HUES9 GSE106870.RAD21.hiPSC_HUES9 171 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 211 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 211 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 211 bp overlap
ChIP hiPSC_IID12 GSE106870.RAD21.hiPSC_IID12 130 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 211 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 211 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 211 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 211 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 209 bp overlap
RING1 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.RING1.SYO-1_shRING1A-B 99 bp overlap
RNF2 3 datasets
ChIP A-549 ENCSR798EGJ.RNF2.A-549 211 bp overlap
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 211 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 116 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 74 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 126 bp overlap
SMAD2 2 datasets
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
Motif DE_36h DE_36h-SMAD2_MA1964.2 6 bp overlap
SMAD3 3 datasets
ChIP BG03 GSE36578.SMAD3.BG03 115 bp overlap
Motif DE_12h DE_12h-SMAD3_MA0795.1 10 bp overlap
Motif DE_36h DE_36h-SMAD3_MA0795.1 10 bp overlap
SMAD5 2 datasets
Motif DE_12h DE_12h-SMAD5_MA1557.1 10 bp overlap
Motif DE_36h DE_36h-SMAD5_MA1557.1 10 bp overlap
SMC3 4 datasets
ChIP HEK293T_CRISPR GSE122299.SMC3.HEK293T_CRISPR 123 bp overlap
ChIP HEK293T_WT GSE122299.SMC3.HEK293T_WT 177 bp overlap
ChIP hESC_D0 GSE116862.SMC3.hESC_D0 165 bp overlap
ChIP neural ENCSR404BPV.SMC3.neural 70 bp overlap
SS18 1 dataset
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 177 bp overlap
STAG1 1 dataset
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 92 bp overlap
STAG2 1 dataset
ChIP MCF-10A_siSTAG1 GSE101921.STAG2.MCF-10A_siSTAG1 150 bp overlap
SUZ12 7 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 108 bp overlap
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 211 bp overlap
ChIP HEK293T_PCGF1356fl GSE119618.SUZ12.HEK293T_PCGF1356fl 211 bp overlap
ChIP HEK293T_PCGF1356fl_OHT GSE119618.SUZ12.HEK293T_PCGF1356fl_OHT 103 bp overlap
ChIP HEK293T_PCGF135fl_OHT GSE119618.SUZ12.HEK293T_PCGF135fl_OHT 57 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.SUZ12.HEK293T_PCGF2fl 211 bp overlap
ChIP SYO-1_shCt GSE139053.SUZ12.SYO-1_shCt 211 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 211 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 87 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 187 bp overlap
ZFP42 2 datasets
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
Motif DE_36h DE_36h-ZFP42_MA1651.2 13 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 200 bp overlap
ZNF148 1 dataset
Motif DE_36h DE_36h-ZNF148_MA1653.2 10 bp overlap
ZNF281 1 dataset
Motif DE_36h DE_36h-ZNF281_MA1630.3 10 bp overlap
Zic2 2 datasets
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap
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