chrX : 111,270,390 111,270,657
267 bp 32 TFs 1 linked gene
This 267 bp open chromatin element is linked to CAPN6 and is bound by 32 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CAPN6 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:111,265,390 – 111,275,657
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 124 bp overlap
BRD4 4 datasets
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 212 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 86 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 142 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 267 bp overlap
CDK8 1 dataset
ChIP leiomyoma_PT967 GSE128230.CDK8.leiomyoma_PT967 126 bp overlap
CDK9 2 datasets
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 167 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.CDK9.MM1-S_JQ1_50NM 267 bp overlap
CDKN1B 2 datasets
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 208 bp overlap
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 140 bp overlap
CHD1 1 dataset
ChIP H1 ENCFF128BID 267 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 166 bp overlap
CTCF 1 dataset
ChIP nerve_tibial ENCSR822PJT.CTCF.nerve_tibial 196 bp overlap
E2F4 1 dataset
ChIP MCF-10A ENCSR000DOR.E2F4.MCF-10A 137 bp overlap
EP300 2 datasets
ChIP H1 ENCFF927IYK 236 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 231 bp overlap
ESR1 1 dataset
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 250 bp overlap
EZH2 1 dataset
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 267 bp overlap
JUN 1 dataset
ChIP ESC S34-ESC-d0-JUN-exp2 267 bp overlap
JUND 3 datasets
ChIP H1 ENCFF010YXS 235 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 174 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 149 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 119 bp overlap
MED1 2 datasets
ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 182 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 136 bp overlap
MED12 1 dataset
ChIP myometrium_PT886 GSE128230.MED12.myometrium_PT886 60 bp overlap
NR1H2 2 datasets
ChIP HT29_GW3965_2H GSE77039.NR1H2.HT29_GW3965_2H 234 bp overlap
ChIP HT29_GW3965_48H GSE77039.NR1H2.HT29_GW3965_48H 189 bp overlap
PGR 1 dataset
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 266 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 98 bp overlap
POLR2A 4 datasets
ChIP body of pancreas ENCFF501FEC 267 bp overlap
ChIP body of pancreas ENCFF727UBE 267 bp overlap
ChIP esophagus squamous epithelium ENCFF708IOX 267 bp overlap
ChIP thyroid gland ENCFF979LRR 267 bp overlap
PRDM10 5 datasets
ChIP HEK293 ENCFF145WQQ 255 bp overlap
ChIP Hep-G2 ENCSR289PSX.PRDM10.Hep-G2 222 bp overlap
ChIP HepG2 ENCFF324FNA 200 bp overlap
ChIP K-562 ENCSR120MPG.PRDM10.K-562 267 bp overlap
ChIP K562 ENCFF740YLK 240 bp overlap
PRDM15 3 datasets
ChIP Hep-G2 ENCSR011INW.PRDM15.Hep-G2 128 bp overlap
ChIP HepG2 ENCFF259LUZ 265 bp overlap
ChIP WTC11 ENCFF108TMF 235 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 214 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 267 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 227 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 136 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 267 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 188 bp overlap
TP53 1 dataset
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 200 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 155 bp overlap
ZNF143 1 dataset
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 168 bp overlap