chr21 : 42,929,391 42,929,898
507 bp 42 TFs 1 linked gene
This 507 bp open chromatin element is linked to ERVH48-1 and is bound by 42 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ERVH48-1 3.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr21:42,924,391 – 42,934,898
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
42 transcription factors
Source
Cell type
ATF1 1 dataset
ChIP K562 ENCFF817JQF 97 bp overlap
ATF4 2 datasets
ChIP K-562 ENCSR145TSJ.ATF4.K-562 324 bp overlap
ChIP K562 ENCFF674KTF 286 bp overlap
BCOR 1 dataset
ChIP K-562 ENCSR808AKZ.BCOR.K-562 51 bp overlap
BRD4 1 dataset
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 238 bp overlap
CEBPG 2 datasets
ChIP K562 ENCFF783ADE 336 bp overlap
ChIP K562 ENCFF956TPS 314 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF335XTP 479 bp overlap
ChIP BLaER1 ENCFF460KDD 258 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 412 bp overlap
EP400 1 dataset
ChIP K562 ENCFF850OZQ 470 bp overlap
FOSL1 1 dataset
ChIP K562 ENCFF455MKD 180 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 106 bp overlap
ChIP DE DE-FOXA2-2 420 bp overlap
GATA1 3 datasets
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 55 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 212 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 145 bp overlap
GATA2 5 datasets
ChIP K562 ENCFF830LLA 77 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 507 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 335 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.GATA2.SKH1_RUNX1-EVI1_KD 196 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 185 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 507 bp overlap
ChIP DE DE-GATA4-2 507 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 507 bp overlap
ChIP DE DE-GATA6-2 507 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 285 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 410 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 507 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 53 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR563YDA.HDGF.K-562 170 bp overlap
ChIP K-562 ENCSR197ALX.HDGF.K-562 58 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 507 bp overlap
ChIP K562 ENCFF348IBL 378 bp overlap
ChIP K562 ENCFF771OHZ 259 bp overlap
MLLT1 1 dataset
ChIP K562 ENCFF074XRJ 105 bp overlap
MNT 1 dataset
ChIP K562 ENCFF820IGH 176 bp overlap
NCAPH2 1 dataset
ChIP RMG-I_ARID1A-KO GSE120058.NCAPH2.RMG-I_ARID1A-KO 195 bp overlap
NRF1 2 datasets
ChIP K562 ENCFF791UHF 405 bp overlap
ChIP K562 ENCFF791UHF 393 bp overlap
OTX1 1 dataset
ChIP K562 ENCFF829SLD 305 bp overlap
SKIL 1 dataset
ChIP K562 ENCFF560QSF 305 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 507 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 51 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 67 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 103 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 94 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 229 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 507 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 507 bp overlap
SMAD4 2 datasets
ChIP K562 ENCFF628RBP 389 bp overlap
ChIP K562 ENCFF628RBP 179 bp overlap
SMARCC2 1 dataset
ChIP K562 ENCFF368GSR 409 bp overlap
SMARCE1 2 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 507 bp overlap
ChIP K562 ENCFF690CFF 161 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 328 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 507 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 337 bp overlap
ChIP K562 ENCFF059YCJ 409 bp overlap
SP1 1 dataset
ChIP K562 ENCFF088XXV 326 bp overlap
SPI1 15 datasets
ChIP BDMC_donorG GSE128834.SPI1.BDMC_donorG 129 bp overlap
ChIP BDMC_donorH GSE128834.SPI1.BDMC_donorH 134 bp overlap
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 189 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 189 bp overlap
ChIP HL-60 ENCFF645GBT 99 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 256 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 187 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 196 bp overlap
ChIP K-562_SAHA GSE74999.SPI1.K-562_SAHA 158 bp overlap
ChIP K562 ENCFF410ORC 126 bp overlap
ChIP KG-1 GSE128834.SPI1.KG-1 198 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 249 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 147 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 137 bp overlap
ChIP primary-neutrophil_donorE GSE128834.SPI1.primary-neutrophil_donorE 107 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 151 bp overlap
ZBTB40 2 datasets
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 264 bp overlap
ChIP K562 ENCFF521DSV 185 bp overlap
ZFX 1 dataset
ChIP K562 ENCFF536AJO 446 bp overlap
ZNF18 1 dataset
ChIP HEK293 ENCFF066NGR 147 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCFF799ATK 82 bp overlap
ZNF512 1 dataset
ChIP K562 ENCFF601EMZ 151 bp overlap
ZNF770 2 datasets
ChIP HEK293 ENCFF468FCG 85 bp overlap
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 245 bp overlap