chr2 : 14,405,904 – 14,406,535
631 bp 34 TFs 1 linked gene
This 631 bp open chromatin element is linked to LINC00276 and is bound by 34 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LINC00276 4.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:14,400,904 – 14,411,535
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
34 transcription factors
Source
Cell type
AR 52 datasets
ChIP 22Rv1_pLKO GSE109748.AR.22Rv1_pLKO 169 bp overlap
ChIP DUCAP_ANDROGEN GSE70679.AR.DUCAP_ANDROGEN 168 bp overlap
ChIP LNCaP GSE85558.AR.LNCaP 210 bp overlap
ChIP LNCaP GSE117430.AR.LNCaP 207 bp overlap
ChIP LNCaP-C4-2B_R1881_SHCTR GSE61268.AR.LNCaP-C4-2B_R1881_SHCTR 127 bp overlap
ChIP LNCaP_1F5 GSE30623.AR.LNCaP_1F5 224 bp overlap
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 205 bp overlap
ChIP LNCaP_Bag-1L_KO_DHT GSE89938.AR.LNCaP_Bag-1L_KO_DHT 201 bp overlap
ChIP LNCaP_Bag1L_KO_Bag1L_Rescue_DHT_4h GSE89938.AR.LNCaP_Bag1L_KO_Bag1L_Rescue_DHT_4h 320 bp overlap
ChIP LNCaP_DHT GSE125245.AR.LNCaP_DHT 214 bp overlap
ChIP LNCaP_DSG GSE114737.AR.LNCaP_DSG 171 bp overlap
ChIP LNCaP_ETOH GSE69043.AR.LNCaP_ETOH 153 bp overlap
ChIP LNCaP_R1881 GSE62492.AR.LNCaP_R1881 211 bp overlap
ChIP LNCaP_R1881 GSE61268.AR.LNCaP_R1881 183 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 349 bp overlap
ChIP LNCaP_SHFOXP1_DHT GSE62492.AR.LNCaP_SHFOXP1_DHT 118 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 293 bp overlap
ChIP LNCaP_Talen_DHT GSE89938.AR.LNCaP_Talen_DHT 439 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 58 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 344 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 248 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 202 bp overlap
ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 131 bp overlap
ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 259 bp overlap
ChIP VCaP GSE148358.AR.VCaP 228 bp overlap
ChIP VCaP GSE32892.AR.VCaP 183 bp overlap
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 332 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 388 bp overlap
ChIP VCaP_DHT GSE79128.AR.VCaP_DHT 383 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 557 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 390 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 577 bp overlap
ChIP VCaP_DHTTHZ1 GSE125245.AR.VCaP_DHTTHZ1 353 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 262 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 361 bp overlap
ChIP VCaP_R1881 GSE79128.AR.VCaP_R1881 228 bp overlap
ChIP VCaP_R1881_10C26 GSE32892.AR.VCaP_R1881_10C26 198 bp overlap
ChIP VCaP_R1881_10C30 GSE32892.AR.VCaP_R1881_10C30 152 bp overlap
ChIP VCaP_R1881_1C26 GSE32892.AR.VCaP_R1881_1C26 173 bp overlap
ChIP VCaP_R1881_1C30 GSE32892.AR.VCaP_R1881_1C30 214 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 375 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 408 bp overlap
ChIP VCaP_SH1_DHT GSE79128.AR.VCaP_SH1_DHT 413 bp overlap
ChIP VCaP_SH1_R1881 GSE79128.AR.VCaP_SH1_R1881 307 bp overlap
ChIP VCaP_SH2_DHT GSE79128.AR.VCaP_SH2_DHT 381 bp overlap
ChIP VCaP_SH2_R1881 GSE79128.AR.VCaP_SH2_R1881 344 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 239 bp overlap
ChIP breast-cancer_ENOB-2854 GSE128018.AR.breast-cancer_ENOB-2854 490 bp overlap
ChIP prostate-cancer_C4-2-CON GSE136128.AR.prostate-cancer_C4-2-CON 209 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.AR.prostate-cancer_PDX_167 250 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.AR.prostate-cancer_PDX_92 66 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 247 bp overlap
ASH2L 1 dataset
ChIP VCaP_R1881 GSE60841.ASH2L.VCaP_R1881 150 bp overlap
BCOR 1 dataset
ChIP VCaP_EtOH GSE122572.BCOR.VCaP_EtOH 216 bp overlap
BRD4 4 datasets
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 281 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 243 bp overlap
ChIP VCaP_Darolutamide GSE148358.BRD4.VCaP_Darolutamide 181 bp overlap
ChIP VCaP_R1881 GSE148358.BRD4.VCaP_R1881 340 bp overlap
CREB1 2 datasets
ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 97 bp overlap
ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 98 bp overlap
CTCF 8 datasets
ChIP GM13977 ENCFF528ESQ 136 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 95 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 253 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 131 bp overlap
ChIP MCF-7 ENCFF198DQX 161 bp overlap
ChIP MCF-7 ENCFF494VXA 161 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 143 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 116 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 160 bp overlap
ERG 6 datasets
ChIP VCaP GSE49091.ERG.VCaP 208 bp overlap
ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 123 bp overlap
ChIP VCaP_DHAT_2H GSE28950.ERG.VCaP_DHAT_2H 336 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 148 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 240 bp overlap
ChIP VCaP_SH1_DHT GSE79128.ERG.VCaP_SH1_DHT 164 bp overlap
ESR1 12 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 134 bp overlap
ChIP MCF-7 GSE68356.ESR1.MCF-7 300 bp overlap
ChIP MCF-7 GSE95302.ESR1.MCF-7 180 bp overlap
ChIP MCF-7_E2 GSE102410.ESR1.MCF-7_E2 201 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 162 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 156 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 137 bp overlap
ChIP MCF-7_Tamoxifen GSE102410.ESR1.MCF-7_Tamoxifen 218 bp overlap
ChIP ZR751 ERP000783.ESR1.ZR751 163 bp overlap
ChIP breast-cancer_3487 GSE126004.ESR1.breast-cancer_3487 266 bp overlap
ChIP breast-cancer_S176 GSE128018.ESR1.breast-cancer_S176 237 bp overlap
ChIP breast-cancer_S440-2187 GSE128018.ESR1.breast-cancer_S440-2187 430 bp overlap
FOXA1 54 datasets
ChIP A1A3_EtOH GSE112491.FOXA1.A1A3_EtOH 295 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 446 bp overlap
ChIP LNCaP-C4-2B_DHT GSE40050.FOXA1.LNCaP-C4-2B_DHT 262 bp overlap
ChIP LNCaP-C4-2B_TFS GSE123618.FOXA1.LNCaP-C4-2B_TFS 107 bp overlap
ChIP LNCaP_1F5 GSE30623.FOXA1.LNCaP_1F5 229 bp overlap
ChIP LNCaP_1F5_SIFOXA1 GSE30623.FOXA1.LNCaP_1F5_SIFOXA1 88 bp overlap
ChIP LNCaP_DHT GSE28264.FOXA1.LNCaP_DHT 143 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 193 bp overlap
ChIP LNCaP_G87R_shFOXA1 GSE128883.FOXA1.LNCaP_G87R_shFOXA1 144 bp overlap
ChIP LNCaP_L388M_shFOXA1 GSE128883.FOXA1.LNCaP_L388M_shFOXA1 150 bp overlap
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 308 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 82 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.FOXA1.LNCaP_SHGATA2_R1881 146 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 137 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 192 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 196 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 131 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 218 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 180 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 137 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 186 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 80 bp overlap
ChIP MCF-7_JC4691 GSE126004.FOXA1.MCF-7_JC4691 306 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 567 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 224 bp overlap
ChIP MCF-7_JC4695 GSE126004.FOXA1.MCF-7_JC4695 277 bp overlap
ChIP MCF-7_JC4696 GSE126004.FOXA1.MCF-7_JC4696 211 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 189 bp overlap
ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 137 bp overlap
ChIP MCF-7_estrogen_ab1 GSE112969.FOXA1.MCF-7_estrogen_ab1 477 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 516 bp overlap
ChIP MCF-7_siFEN1 GSE95302.FOXA1.MCF-7_siFEN1 177 bp overlap
ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 506 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 614 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 282 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 116 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 149 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 605 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 331 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 216 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 169 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 327 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 143 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 164 bp overlap
ChIP breast-cancer_3487 GSE126004.FOXA1.breast-cancer_3487 226 bp overlap
ChIP breast-cancer_ENOB-2849 GSE128018.FOXA1.breast-cancer_ENOB-2849 427 bp overlap
ChIP breast-cancer_ENOB-2852 GSE128018.FOXA1.breast-cancer_ENOB-2852 193 bp overlap
ChIP breast-cancer_Veh-131 GSE128018.FOXA1.breast-cancer_Veh-131 299 bp overlap
ChIP breast-cancer_Veh-131 GSE128018.FOXA1.breast-cancer_Veh-131 127 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 631 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 631 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 516 bp overlap
ChIP prostate_2078_T GSE130408.FOXA1.prostate_2078_T 163 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 324 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 137 bp overlap
ChIP DE DE-FOXA2-1 631 bp overlap
ChIP DE DE-FOXA2-2 631 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 603 bp overlap
GATA2 5 datasets
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 226 bp overlap
ChIP LNCaP_FBS GSE69043.GATA2.LNCaP_FBS 140 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 307 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 240 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 307 bp overlap
GATA3 3 datasets
ChIP MCF-7 GSE133072.GATA3.MCF-7 178 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 105 bp overlap
ChIP T47D-A1-2_Dex GSE112491.GATA3.T47D-A1-2_Dex 186 bp overlap
GATA3_Nter 1 dataset
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 225 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 409 bp overlap
ChIP DE DE-GATA4-2 631 bp overlap
ChIP foregut GSE117136.GATA4.foregut 311 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 631 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 381 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 511 bp overlap
ChIP DE DE-GATA6-2 631 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 265 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 180 bp overlap
ChIP foregut GSE117136.GATA6.foregut 164 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 209 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 255 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 307 bp overlap
HOXB13 5 datasets
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 291 bp overlap
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 148 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 250 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 177 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 234 bp overlap
JUN 1 dataset
ChIP MCF-7_E2 GSE102410.JUN.MCF-7_E2 105 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 631 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 128 bp overlap
MED1 2 datasets
ChIP VCaP_DHTTHZ1 GSE125245.MED1.VCaP_DHTTHZ1 235 bp overlap
ChIP VCaP_R1881 GSE148358.MED1.VCaP_R1881 266 bp overlap
NEUROD1 3 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 286 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 288 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 143 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 307 bp overlap
NRIP1 1 dataset
ChIP MCF-7 ERP005838.NRIP1.MCF-7 125 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 143 bp overlap
RAD21 4 datasets
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 97 bp overlap
ChIP MCF-7 ENCFF724VCQ 162 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 113 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 96 bp overlap
RUNX1 2 datasets
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 50 bp overlap
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 393 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 234 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 445 bp overlap
STAG1 2 datasets
ChIP MCF-7 ERP000209.STAG1.MCF-7 83 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 113 bp overlap
STAT3 2 datasets
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 458 bp overlap
ChIP breast-cancer_3487 GSE126004.STAT3.breast-cancer_3487 186 bp overlap
TAL1 1 dataset
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 144 bp overlap
TLE3 1 dataset
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 254 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 69 bp overlap
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