chr19 : 35,052,861 35,053,603
742 bp 45 TFs 0 linked genes
This 742 bp open chromatin element has no linked target genes and is bound by 45 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:35,047,861 – 35,058,603
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
45 transcription factors
Source
Cell type
AGO2 3 datasets
ChIP HepG2 ENCFF252VFI 245 bp overlap
ChIP HepG2 ENCFF252VFI 54 bp overlap
ChIP HepG2 ENCFF773YDL 54 bp overlap
ARID2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 278 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-T910M 253 bp overlap
ATF4 1 dataset
ChIP K-562 ENCSR145TSJ.ATF4.K-562 157 bp overlap
BCL3 1 dataset
ChIP A-549 ENCSR000BQH.BCL3.A-549 177 bp overlap
CEBPB 2 datasets
ChIP A-549 ENCSR000BUB.CEBPB.A-549 165 bp overlap
ChIP HeLa-S3 ENCFF722WEG 234 bp overlap
CHD2 1 dataset
ChIP HeLa-S3 ENCSR000ECP.CHD2.HeLa-S3 111 bp overlap
DPF2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.DPF2.BIN-67_lentivirus-SMARCA4 163 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-K785R 212 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 452 bp overlap
ERG 1 dataset
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 136 bp overlap
ESR1 1 dataset
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 151 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 221 bp overlap
FOXA1 1 dataset
ChIP A-549 ENCSR000BPX.FOXA1.A-549 129 bp overlap
GATA6 3 datasets
ChIP DE_D1 S41-DE-d1-GATA6-exp2 278 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 273 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 361 bp overlap
HNF4A 1 dataset
Motif DE_24h DE_24h-HNF4A_MA0114.5 9 bp overlap
HNF4G 1 dataset
Motif DE_24h DE_24h-HNF4G_MA0484.3 9 bp overlap
HNRNPK 1 dataset
ChIP K-562 GSE120104.HNRNPK.K-562 172 bp overlap
Hmga1 1 dataset
Motif DE_24h DE_24h-Hmga1_MA2124.1 8 bp overlap
Hnf1A 1 dataset
Motif DE_24h DE_24h-Hnf1A_MA1991.2 10 bp overlap
IFNA1 1 dataset
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 645 bp overlap
KLF1 1 dataset
ChIP HEK293 GSE76494.KLF1.HEK293 171 bp overlap
KMT2C 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2C.BIN-67_lentivirus-SMARCA4 193 bp overlap
MEF2A 1 dataset
Motif DE_24h DE_24h-MEF2A_MA0052.5 10 bp overlap
MEF2B 1 dataset
Motif DE_24h DE_24h-MEF2B_MA0660.1 12 bp overlap
MEF2C 1 dataset
Motif DE_24h DE_24h-MEF2C_MA0497.2 11 bp overlap
MEF2D 1 dataset
Motif DE_24h DE_24h-MEF2D_MA0773.1 12 bp overlap
Nr2e1 1 dataset
Motif DE_24h DE_24h-Nr2e1_MA0676.1 9 bp overlap
POLR2A 2 datasets
ChIP HepG2 ENCFF252NAR 387 bp overlap
ChIP HepG2 ENCFF736SLT 412 bp overlap
POLR2G 2 datasets
ChIP HepG2 ENCFF241AEG 385 bp overlap
ChIP HepG2 ENCFF508UTS 412 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 732 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 324 bp overlap
RELA 1 dataset
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 274 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 619 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 364 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 541 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 294 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 405 bp overlap
SMARCA4 3 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 221 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 293 bp overlap
ChIP BT-16_Dox GSE71504.SMARCA4.BT-16_Dox 249 bp overlap
SMARCC1 3 datasets
ChIP BIN-67 GSE117734.SMARCC1.BIN-67 144 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-K785R 205 bp overlap
ChIP BT-16_Dox GSE71504.SMARCC1.BT-16_Dox 162 bp overlap
SREBF1 1 dataset
Motif DE_24h DE_24h-SREBF1_MA0595.1 10 bp overlap
SREBF2 1 dataset
Motif DE_24h DE_24h-SREBF2_MA0596.1 10 bp overlap
SS18 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SS18.BIN-67_lentivirus-SMARCA4-K785R 194 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 195 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 382 bp overlap
TAF15 1 dataset
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 185 bp overlap
TCF7L1 1 dataset
Motif DE_24h DE_24h-TCF7L1_MA1421.1 12 bp overlap
ZKSCAN1 5 datasets
ChIP HeLa-S3 ENCFF104OCU 145 bp overlap
ChIP HeLa-S3 ENCSR000ECJ.ZKSCAN1.HeLa-S3 123 bp overlap
ChIP Hep-G2 ENCSR157CAU.ZKSCAN1.Hep-G2 92 bp overlap
ChIP HepG2 ENCFF578KDY 125 bp overlap
ChIP K-562 ENCSR882ERE.ZKSCAN1.K-562 170 bp overlap
ZNF574 1 dataset
Motif DE_24h DE_24h-ZNF574_MA1982.2 14 bp overlap
ZNF768 1 dataset
Motif DE_24h DE_24h-ZNF768_MA1731.2 9 bp overlap
ZNF816 1 dataset
Motif DE_24h DE_24h-ZNF816_MA1719.2 15 bp overlap