chr18 : 73,331,336 – 73,331,674

338 bp 66 TFs 1 linked gene

This 338 bp open chromatin element is linked to LINC02582 and is bound by 66 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
LINC02582		4.7 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

66 transcription factors

Ahr::Arnt 1 dataset

Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap

BARX1 1 dataset

Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap

BHLHE22 1 dataset

Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap

BSX 1 dataset

Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap

Bhlha15 1 dataset

Motif DE_12h DE_12h-Bhlha15_MA1472.3 8 bp overlap

CDK6 1 dataset

ChIP KB_IL GSE52469.CDK6.KB_IL 149 bp overlap

CHD2 1 dataset

ChIP A-549 ENCSR067HGI.CHD2.A-549 334 bp overlap

DLX1 1 dataset

Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap

Dlx2 1 dataset

Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap

Dlx3 1 dataset

Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap

Dlx5 1 dataset

Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap

EHF 1 dataset

ChIP A-549 ENCSR171TDM.EHF.A-549 338 bp overlap

Elf5 1 dataset

Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap

FERD3L 1 dataset

Motif DE_12h DE_12h-FERD3L_MA1485.1 14 bp overlap

FEZF2 1 dataset

Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap

FOSB 1 dataset

ChIP A549 ENCFF029EEU 274 bp overlap

FOSL2 1 dataset

ChIP A-549 ENCSR448TVS.FOSL2.A-549 173 bp overlap

GBX2 1 dataset

Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap

GRHL2 1 dataset

ChIP HBE GSE46194.GRHL2.HBE 125 bp overlap

HDAC2 1 dataset

ChIP PC-3 GSE147455.HDAC2.PC-3 143 bp overlap

HESX1 1 dataset

Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap

HMGA2 1 dataset

ChIP A549 ENCFF624CAQ 271 bp overlap

HNF4A 2 datasets

Motif DE_12h DE_12h-HNF4A_MA1494.2 14 bp overlap

ChIP KATO-III GSE114018.HNF4A.KATO-III 182 bp overlap

HOXA7 2 datasets

ChIP A549 ENCFF746ZBJ 249 bp overlap

Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap

HOXB5 1 dataset

ChIP A-549 ENCSR748HJZ.HOXB5.A-549 319 bp overlap

IKZF2 2 datasets

Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap

JUN 1 dataset

ChIP A549 ENCFF191QZG 338 bp overlap

LBX2 1 dataset

Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap

LHX2 1 dataset

Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap

LIN54 1 dataset

Motif DE_12h DE_12h-LIN54_MA0619.2 7 bp overlap

Lhx3 1 dataset

Motif DE_12h DE_12h-Lhx3_MA0135.2 12 bp overlap

MEIS1 2 datasets

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

MGA 1 dataset

ChIP A-549_MGA-OE GSE112188.MGA.A-549_MGA-OE 208 bp overlap

MSX1 1 dataset

Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap

MYF5 1 dataset

Motif DE_12h DE_12h-MYF5_MA1641.2 8 bp overlap

Msx3 1 dataset

Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap

NANOG 5 datasets

ChIP WA01 ERP004238.NANOG.WA01 177 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 320 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 244 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 166 bp overlap

ChIP hESC GSE18292.NANOG.hESC 93 bp overlap

NEUROD1 1 dataset

Motif DE_12h DE_12h-NEUROD1_MA1109.2 8 bp overlap

NR2E3 1 dataset

ChIP A549 ENCFF833WDR 110 bp overlap

NR5A2 2 datasets

ChIP A-549 ENCSR190GIW.NR5A2.A-549 338 bp overlap

ChIP A549 ENCFF834RVE 338 bp overlap

Neurod2 2 datasets

Motif DE_12h DE_12h-Neurod2_MA0668.3 8 bp overlap

Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap

Nobox 1 dataset

Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap

Olig2 1 dataset

Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap

POLR2A 1 dataset

ChIP A549 ENCFF034EBG 331 bp overlap

POU5F1 1 dataset

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 114 bp overlap

Ptf1A 1 dataset

Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap

RAX 1 dataset

Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap

SIX1 1 dataset

Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap

SIX2 1 dataset

Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap

SMC3 1 dataset

ChIP GP5D GSE51234.SMC3.GP5D 182 bp overlap

SUPT6H 2 datasets

ChIP HCT-116 GSE130509.SUPT6H.HCT-116 182 bp overlap

ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 228 bp overlap

Six4 1 dataset

Motif DE_12h DE_12h-Six4_MA2001.2 7 bp overlap

TP63 5 datasets

ChIP A549 ENCFF399JYQ 287 bp overlap

ChIP BxPC-3 GSE115461.TP63.BxPC-3 230 bp overlap

ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 253 bp overlap

ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 192 bp overlap

ChIP keratinocyte_epidermal GSE67382.TP63.keratinocyte_epidermal 164 bp overlap

Tcf12 1 dataset

Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap

Twist2 1 dataset

Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap

ZBTB18 1 dataset

Motif DE_12h DE_12h-ZBTB18_MA0698.2 11 bp overlap

ZBTB6 1 dataset

Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap

ZNF213 1 dataset

Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap

ZNF354C 1 dataset

Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap

ZNF462 1 dataset

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 219 bp overlap

ZNF549 1 dataset

Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap

ZNF680 1 dataset

Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap

Zic2 1 dataset

Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap