chr18 : 65,954,349 – 65,954,726

377 bp 69 TFs 0 linked genes

This 377 bp open chromatin element has no linked target genes and is bound by 69 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

69 transcription factors

Ahr::Arnt 2 datasets

Motif DE_48h DE_48h-AhrArnt_MA0006.2 5 bp overlap

Motif DE_60h DE_60h-AhrArnt_MA0006.2 5 bp overlap

BARX1 1 dataset

Motif DE_60h DE_60h-BARX1_MA0875.2 6 bp overlap

BSX 1 dataset

Motif DE_60h DE_60h-BSX_MA0876.2 6 bp overlap

CTCF 2 datasets

Motif DE_48h DE_48h-CTCF_MA0139.2 15 bp overlap

Motif DE_60h DE_60h-CTCF_MA0139.2 15 bp overlap

DLX1 1 dataset

Motif DE_60h DE_60h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif DE_60h DE_60h-DLX6_MA0882.2 6 bp overlap

Dlx3 1 dataset

Motif DE_60h DE_60h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif DE_60h DE_60h-Dlx4_MA0881.2 6 bp overlap

E2F6 1 dataset

Motif DE_48h DE_48h-E2F6_MA0471.3 8 bp overlap

ELF1 2 datasets

Motif DE_48h DE_48h-ELF1_MA0473.4 9 bp overlap

Motif DE_60h DE_60h-ELF1_MA0473.4 9 bp overlap

ELF3 2 datasets

Motif DE_48h DE_48h-ELF3_MA0640.3 9 bp overlap

Motif DE_60h DE_60h-ELF3_MA0640.3 9 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 232 bp overlap

Erg 2 datasets

Motif DE_48h DE_48h-Erg_MA0474.4 10 bp overlap

Motif DE_60h DE_60h-Erg_MA0474.4 10 bp overlap

FOXA1 1 dataset

ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 285 bp overlap

FOXA2 3 datasets

ChIP DE DE-FOXA2-1 377 bp overlap

ChIP DE DE-FOXA2-2 377 bp overlap

Motif DE_60h DE_60h-FOXA2_MA0047.4 8 bp overlap

FOXA3 1 dataset

Motif DE_60h DE_60h-FOXA3_MA1683.2 7 bp overlap

FOXI1 1 dataset

Motif DE_60h DE_60h-FOXI1_MA0042.2 7 bp overlap

FOXP1 1 dataset

Motif DE_60h DE_60h-FOXP1_MA0481.4 7 bp overlap

FOXP4 1 dataset

Motif DE_60h DE_60h-FOXP4_MA2117.1 7 bp overlap

FOXS1 1 dataset

Motif DE_60h DE_60h-FOXS1_MA2118.1 8 bp overlap

Foxj3 1 dataset

Motif DE_60h DE_60h-Foxj3_MA0851.2 9 bp overlap

Foxl2 2 datasets

Motif DE_48h DE_48h-Foxl2_MA1607.2 10 bp overlap

Motif DE_60h DE_60h-Foxl2_MA1607.2 10 bp overlap

GABPA 2 datasets

Motif DE_48h DE_48h-GABPA_MA0062.4 10 bp overlap

Motif DE_60h DE_60h-GABPA_MA0062.4 10 bp overlap

GATA4 4 datasets

ChIP DE DE-GATA4-1 377 bp overlap

ChIP DE DE-GATA4-2 377 bp overlap

ChIP foregut GSE117136.GATA4.foregut 377 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 356 bp overlap

GATA6 11 datasets

ChIP DE DE-GATA6-1 377 bp overlap

ChIP DE DE-GATA6-2 377 bp overlap

Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap

Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 266 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 377 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 377 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 372 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 377 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 283 bp overlap

ChIP foregut GSE117136.GATA6.foregut 377 bp overlap

GBX2 1 dataset

Motif DE_60h DE_60h-GBX2_MA0890.2 6 bp overlap

Gata3 2 datasets

Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap

Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap

HESX1 1 dataset

Motif DE_60h DE_60h-HESX1_MA0894.2 6 bp overlap

HOXA7 1 dataset

Motif DE_60h DE_60h-HOXA7_MA1498.3 6 bp overlap

Hmx2 1 dataset

Motif DE_60h DE_60h-Hmx2_MA0897.2 15 bp overlap

Hmx3 1 dataset

Motif DE_60h DE_60h-Hmx3_MA0898.2 9 bp overlap

Hnf1A 1 dataset

Motif DE_60h DE_60h-Hnf1A_MA1991.2 10 bp overlap

ISL2 2 datasets

Motif DE_48h DE_48h-ISL2_MA0914.2 6 bp overlap

Motif DE_60h DE_60h-ISL2_MA0914.2 6 bp overlap

LBX2 1 dataset

Motif DE_60h DE_60h-LBX2_MA0699.2 6 bp overlap

LHX2 1 dataset

Motif DE_60h DE_60h-LHX2_MA0700.3 6 bp overlap

Lhx3 1 dataset

Motif DE_60h DE_60h-Lhx3_MA0135.2 12 bp overlap

MEIS1 2 datasets

Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap

Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap

MGA::EVX1 2 datasets

Motif DE_48h DE_48h-MGAEVX1_MA1960.2 11 bp overlap

Motif DE_60h DE_60h-MGAEVX1_MA1960.2 11 bp overlap

MSX1 1 dataset

Motif DE_60h DE_60h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif DE_60h DE_60h-MSX2_MA0708.3 6 bp overlap

MXI1 2 datasets

Motif DE_48h DE_48h-MXI1_MA1108.3 6 bp overlap

Motif DE_60h DE_60h-MXI1_MA1108.3 6 bp overlap

Msx3 1 dataset

Motif DE_60h DE_60h-Msx3_MA0709.2 6 bp overlap

Nobox 1 dataset

Motif DE_60h DE_60h-Nobox_MA0125.2 6 bp overlap

ONECUT1 1 dataset

Motif DE_60h DE_60h-ONECUT1_MA0679.3 9 bp overlap

ONECUT3 1 dataset

Motif DE_60h DE_60h-ONECUT3_MA0757.2 12 bp overlap

PAX3 1 dataset

Motif DE_60h DE_60h-PAX3_MA0780.1 10 bp overlap

PBX1 2 datasets

Motif DE_48h DE_48h-PBX1_MA0070.2 9 bp overlap

Motif DE_60h DE_60h-PBX1_MA0070.2 9 bp overlap

PHOX2A 1 dataset

Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap

Pax7 1 dataset

Motif DE_60h DE_60h-Pax7_MA0680.3 10 bp overlap

Pgr 1 dataset

Motif DE_60h DE_60h-Pgr_MA2323.1 17 bp overlap

RARA::RXRG 2 datasets

Motif DE_48h DE_48h-RARARXRG_MA1149.2 17 bp overlap

Motif DE_60h DE_60h-RARARXRG_MA1149.2 17 bp overlap

RAX 1 dataset

Motif DE_60h DE_60h-RAX_MA0718.2 6 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 308 bp overlap

SOX15 2 datasets

Motif DE_48h DE_48h-SOX15_MA1152.2 7 bp overlap

Motif DE_60h DE_60h-SOX15_MA1152.2 7 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 321 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 377 bp overlap

SP5 2 datasets

Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap

Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap

SRY 2 datasets

Motif DE_48h DE_48h-SRY_MA0084.2 7 bp overlap

Motif DE_60h DE_60h-SRY_MA0084.2 7 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 198 bp overlap

TCF7L1 1 dataset

Motif DE_60h DE_60h-TCF7L1_MA1421.1 12 bp overlap

TRPS1 2 datasets

Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap

Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap

ZBTB17 1 dataset

Motif DE_60h DE_60h-ZBTB17_MA2102.1 8 bp overlap

ZIC1 1 dataset

Motif DE_48h DE_48h-ZIC1_MA0696.1 14 bp overlap

ZIC4 1 dataset

Motif DE_48h DE_48h-ZIC4_MA0751.2 14 bp overlap

ZIC5 1 dataset

Motif DE_48h DE_48h-ZIC5_MA1584.2 15 bp overlap

ZKSCAN5 2 datasets

Motif DE_48h DE_48h-ZKSCAN5_MA1652.2 9 bp overlap

Motif DE_60h DE_60h-ZKSCAN5_MA1652.2 9 bp overlap

ZNF135 2 datasets

Motif DE_48h DE_48h-ZNF135_MA1587.1 14 bp overlap

Motif DE_60h DE_60h-ZNF135_MA1587.1 14 bp overlap

ZNF16 2 datasets

Motif DE_48h DE_48h-ZNF16_MA1654.2 21 bp overlap

Motif DE_60h DE_60h-ZNF16_MA1654.2 21 bp overlap

ZNF610 3 datasets

ChIP HEK293 ENCFF778UKJ 302 bp overlap

ChIP HEK293 ENCFF778UKJ 143 bp overlap

ChIP HEK293 ENCSR691TXI.ZNF610.HEK293 377 bp overlap