chr18 : 57,696,903 57,697,716
813 bp 39 TFs 6 linked genes
This 813 bp open chromatin element is linked to 6 target genes and is bound by 39 transcription factors.
Linked Genes
6 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
ENSG00000267787 945 bp At TSS Proximity
ATP8B1-AS1 67.1 kb Distal Multiome
NARS1 75.6 kb Distal Multiome
ATP8B1 105.9 kb Distal Multiome
FECH 110.7 kb Distal Multiome
ONECUT2 262.0 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:57,691,903 – 57,702,716
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
39 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate GSE56288.AR.prostate 130 bp overlap
CDK8 1 dataset
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 69 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 204 bp overlap
CTCF 1 dataset
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 103 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 181 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 150 bp overlap
ESR1 8 datasets
Motif DE_72h DE_72h-ESR1_MA0112.4 15 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 236 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 218 bp overlap
ChIP MCF-7_RAD001 GSE103023.ESR1.MCF-7_RAD001 155 bp overlap
ChIP MCF-7_shTEAD4 GSE125594.ESR1.MCF-7_shTEAD4 196 bp overlap
ChIP MCF-7_shYAP1 GSE125594.ESR1.MCF-7_shYAP1 180 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 273 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 226 bp overlap
ETS1 1 dataset
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 173 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 669 bp overlap
ChIP DE DE-FOXA2-2 422 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 719 bp overlap
ChIP DE DE-GATA4-2 780 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 768 bp overlap
ChIP DE DE-GATA6-2 813 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 419 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 648 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 292 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 549 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 515 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 386 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 384 bp overlap
GRHL2 1 dataset
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 216 bp overlap
MAF 1 dataset
Motif DE_72h DE_72h-MAF_MA1520.2 13 bp overlap
MAFA 1 dataset
Motif DE_72h DE_72h-MAFA_MA1521.2 13 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 265 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 119 bp overlap
PRDM9 1 dataset
Motif DE_72h DE_72h-PRDM9_MA1723.2 20 bp overlap
RELA 1 dataset
ChIP HeLa-B2_TA_TNFA GSE24518.RELA.HeLa-B2_TA_TNFA 225 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 275 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 525 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 467 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 348 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 328 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 552 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 230 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 268 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 156 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 223 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 206 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 691 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 233 bp overlap
SOX8 1 dataset
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 220 bp overlap
SPIB 1 dataset
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 175 bp overlap
STAT3 1 dataset
ChIP A139 GSE85579.STAT3.A139 222 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 152 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 205 bp overlap
YY1 1 dataset
ChIP HEK293T_control GSE128106.YY1.HEK293T_control 239 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 230 bp overlap
ZEB1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 114 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 207 bp overlap