chr18 : 57,696,040 57,696,825
785 bp 32 TFs 6 linked genes
This 785 bp open chromatin element is linked to 6 target genes and is bound by 32 transcription factors.
Linked Genes
6 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
ENSG00000267787 82 bp At TSS Proximity
ATP8B1-AS1 66.1 kb Distal Multiome
NARS1 74.6 kb Distal Multiome
ATP8B1 106.9 kb Distal Multiome
FECH 109.7 kb Distal Multiome
ONECUT2 261.1 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:57,691,040 – 57,701,825
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 200 bp overlap
BRD4 4 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 203 bp overlap
ChIP LNCaP-clone-FGC_DHT-Enzalutamide GSE118247.BRD4.LNCaP-clone-FGC_DHT-Enzalutamide 167 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 370 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 269 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 303 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 297 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 656 bp overlap
ChIP DE DE-FOXA2-2 698 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 202 bp overlap
GATA3 1 dataset
ChIP Kelly GSE94822.GATA3.Kelly 260 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 527 bp overlap
ChIP DE DE-GATA4-2 682 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 508 bp overlap
ChIP DE DE-GATA6-2 709 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 517 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 328 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 320 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 265 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 165 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BJR.NR3C1.A-549 116 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 515 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 126 bp overlap
RARA 2 datasets
ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 494 bp overlap
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 446 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 624 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 445 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 449 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 277 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 462 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 396 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 233 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 379 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 379 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 168 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 167 bp overlap
TP63 1 dataset
ChIP keratinocyte GSE33571.TP63.keratinocyte 70 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 158 bp overlap
ZIM3 2 datasets
ChIP HEK293 GSE76494.ZIM3.HEK293 209 bp overlap
ChIP HEK293T GSE78099.ZIM3.HEK293T 161 bp overlap
ZMYM3 1 dataset
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 180 bp overlap
ZNF768 1 dataset
ChIP HepG2 ENCFF388QCK 226 bp overlap