chr18 : 44,403,592 – 44,404,183
591 bp 54 TFs 0 linked genes
This 591 bp open chromatin element has no linked target genes and is bound by 54 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:44,398,592 – 44,409,183
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
54 transcription factors
Source
Cell type
AR 3 datasets
ChIP LHSAR_HOXB13 GSE56288.AR.LHSAR_HOXB13 233 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 137 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 145 bp overlap
BCL11A 1 dataset
Motif DE_60h DE_60h-BCL11A_MA2324.1 7 bp overlap
DUX4 2 datasets
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
EOMES 3 datasets
Motif DE_48h DE_48h-EOMES_MA0800.2 9 bp overlap
Motif DE_60h DE_60h-EOMES_MA0800.2 9 bp overlap
Motif DE_72h DE_72h-EOMES_MA0800.2 9 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 121 bp overlap
FIGLA 3 datasets
Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap
Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 483 bp overlap
ChIP DE DE-FOXA2-2 521 bp overlap
FOXD2 3 datasets
Motif DE_48h DE_48h-FOXD2_MA0847.4 11 bp overlap
Motif DE_60h DE_60h-FOXD2_MA0847.4 11 bp overlap
Motif DE_72h DE_72h-FOXD2_MA0847.4 11 bp overlap
FOXE1 3 datasets
Motif DE_48h DE_48h-FOXE1_MA1487.3 12 bp overlap
Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap
Motif DE_72h DE_72h-FOXE1_MA1487.3 12 bp overlap
FOXP2 3 datasets
Motif DE_48h DE_48h-FOXP2_MA0593.2 9 bp overlap
Motif DE_60h DE_60h-FOXP2_MA0593.2 9 bp overlap
Motif DE_72h DE_72h-FOXP2_MA0593.2 9 bp overlap
GATA1::TAL1 3 datasets
Motif DE_48h DE_48h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_72h DE_72h-GATA1TAL1_MA0140.3 17 bp overlap
GATA2 1 dataset
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 191 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 505 bp overlap
ChIP DE DE-GATA4-2 587 bp overlap
ChIP foregut GSE117136.GATA4.foregut 424 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 229 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 487 bp overlap
ChIP DE DE-GATA6-2 591 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 404 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 409 bp overlap
ChIP foregut GSE117136.GATA6.foregut 411 bp overlap
MEIS1 1 dataset
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_60h DE_60h-MEIS2_MA0774.1 8 bp overlap
MEIS3 1 dataset
Motif DE_60h DE_60h-MEIS3_MA0775.2 7 bp overlap
MSC 2 datasets
Motif DE_60h DE_60h-MSC_MA0665.1 10 bp overlap
Motif DE_72h DE_72h-MSC_MA0665.1 10 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 403 bp overlap
NFIB 5 datasets
Motif DE_48h DE_48h-NFIB_MA1643.2 17 bp overlap
Motif DE_60h DE_60h-NFIB_MA1643.2 17 bp overlap
Motif DE_60h DE_60h-NFIB_MA1643.2 17 bp overlap
Motif DE_72h DE_72h-NFIB_MA1643.2 17 bp overlap
Motif DE_72h DE_72h-NFIB_MA1643.2 17 bp overlap
NFIC 2 datasets
Motif DE_60h DE_60h-NFIC_MA1527.2 15 bp overlap
Motif DE_72h DE_72h-NFIC_MA1527.2 15 bp overlap
NFIX 5 datasets
Motif DE_48h DE_48h-NFIX_MA1528.2 14 bp overlap
Motif DE_60h DE_60h-NFIX_MA1528.2 14 bp overlap
Motif DE_60h DE_60h-NFIX_MA1528.2 14 bp overlap
Motif DE_72h DE_72h-NFIX_MA1528.2 14 bp overlap
Motif DE_72h DE_72h-NFIX_MA1528.2 14 bp overlap
NR3C1 3 datasets
Motif DE_48h DE_48h-NR3C1_MA0113.4 15 bp overlap
Motif DE_60h DE_60h-NR3C1_MA0113.4 15 bp overlap
Motif DE_72h DE_72h-NR3C1_MA0113.4 15 bp overlap
NR3C2 3 datasets
Motif DE_48h DE_48h-NR3C2_MA0727.2 15 bp overlap
Motif DE_60h DE_60h-NR3C2_MA0727.2 15 bp overlap
Motif DE_72h DE_72h-NR3C2_MA0727.2 15 bp overlap
PBX3 1 dataset
Motif DE_60h DE_60h-PBX3_MA1114.2 11 bp overlap
PHOX2A 2 datasets
Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_72h DE_72h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 2 datasets
Motif DE_60h DE_60h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_72h DE_72h-PHOX2B_MA0681.3 12 bp overlap
PKNOX1 1 dataset
Motif DE_60h DE_60h-PKNOX1_MA0782.3 10 bp overlap
POU3F1 2 datasets
Motif DE_60h DE_60h-POU3F1_MA0786.2 10 bp overlap
Motif DE_72h DE_72h-POU3F1_MA0786.2 10 bp overlap
POU3F2 2 datasets
Motif DE_60h DE_60h-POU3F2_MA0787.1 12 bp overlap
Motif DE_72h DE_72h-POU3F2_MA0787.1 12 bp overlap
POU3F3 2 datasets
Motif DE_60h DE_60h-POU3F3_MA0788.1 13 bp overlap
Motif DE_72h DE_72h-POU3F3_MA0788.1 13 bp overlap
PROP1 2 datasets
Motif DE_60h DE_60h-PROP1_MA0715.1 11 bp overlap
Motif DE_72h DE_72h-PROP1_MA0715.1 11 bp overlap
Pgr 3 datasets
Motif DE_48h DE_48h-Pgr_MA2323.1 17 bp overlap
Motif DE_60h DE_60h-Pgr_MA2323.1 17 bp overlap
Motif DE_72h DE_72h-Pgr_MA2323.1 17 bp overlap
Ptf1A 3 datasets
Motif DE_48h DE_48h-Ptf1A_MA1620.2 8 bp overlap
Motif DE_60h DE_60h-Ptf1A_MA1620.2 8 bp overlap
Motif DE_72h DE_72h-Ptf1A_MA1620.2 8 bp overlap
SIX1 1 dataset
Motif DE_60h DE_60h-SIX1_MA1118.2 9 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 265 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 217 bp overlap
SP5 2 datasets
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
TBR1 3 datasets
Motif DE_48h DE_48h-TBR1_MA0802.2 9 bp overlap
Motif DE_60h DE_60h-TBR1_MA0802.2 9 bp overlap
Motif DE_72h DE_72h-TBR1_MA0802.2 9 bp overlap
TBX1 3 datasets
Motif DE_48h DE_48h-TBX1_MA0805.1 8 bp overlap
Motif DE_60h DE_60h-TBX1_MA0805.1 8 bp overlap
Motif DE_72h DE_72h-TBX1_MA0805.1 8 bp overlap
TBX20 3 datasets
Motif DE_48h DE_48h-TBX20_MA0689.1 11 bp overlap
Motif DE_60h DE_60h-TBX20_MA0689.1 11 bp overlap
Motif DE_72h DE_72h-TBX20_MA0689.1 11 bp overlap
ZEB1 3 datasets
Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap
Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
ZNF257 2 datasets
Motif DE_60h DE_60h-ZNF257_MA1710.2 10 bp overlap
Motif DE_72h DE_72h-ZNF257_MA1710.2 10 bp overlap
ZNF263 2 datasets
Motif DE_60h DE_60h-ZNF263_MA0528.3 7 bp overlap
Motif DE_72h DE_72h-ZNF263_MA0528.3 7 bp overlap
ZNF274 3 datasets
Motif DE_48h DE_48h-ZNF274_MA1592.2 12 bp overlap
Motif DE_60h DE_60h-ZNF274_MA1592.2 12 bp overlap
Motif DE_72h DE_72h-ZNF274_MA1592.2 12 bp overlap
ZNF281 2 datasets
Motif DE_60h DE_60h-ZNF281_MA1630.3 10 bp overlap
Motif DE_72h DE_72h-ZNF281_MA1630.3 10 bp overlap
ZNF524 1 dataset
Motif DE_60h DE_60h-ZNF524_MA2096.1 9 bp overlap
ZNF677 2 datasets
Motif DE_60h DE_60h-ZNF677_MA2101.1 12 bp overlap
Motif DE_72h DE_72h-ZNF677_MA2101.1 12 bp overlap
ZNF75A 3 datasets
Motif DE_48h DE_48h-ZNF75A_MA2097.1 12 bp overlap
Motif DE_60h DE_60h-ZNF75A_MA2097.1 12 bp overlap
Motif DE_72h DE_72h-ZNF75A_MA2097.1 12 bp overlap
Zfp335 2 datasets
Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap
Motif DE_72h DE_72h-Zfp335_MA2002.2 7 bp overlap
Zic1::Zic2 2 datasets
Motif DE_60h DE_60h-Zic1Zic2_MA1628.2 7 bp overlap
Motif DE_72h DE_72h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 2 datasets
Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap
Motif DE_72h DE_72h-Zic2_MA1629.2 9 bp overlap
Zic3 2 datasets
Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap
Motif DE_72h DE_72h-Zic3_MA0697.3 7 bp overlap
Znf423 2 datasets
Motif DE_60h DE_60h-Znf423_MA0116.1 15 bp overlap
Motif DE_72h DE_72h-Znf423_MA0116.1 15 bp overlap
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