chr18 : 39,500,302 39,500,628
326 bp 66 TFs 0 linked genes
This 326 bp open chromatin element has no linked target genes and is bound by 66 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:39,495,302 – 39,505,628
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP_F266S_shFOXA1_Ethanol GSE128883.AR.LNCaP_F266S_shFOXA1_Ethanol 135 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 271 bp overlap
Arid3a 1 dataset
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
BARHL1 1 dataset
Motif DE_12h DE_12h-BARHL1_MA0877.4 6 bp overlap
BARHL2 1 dataset
Motif DE_12h DE_12h-BARHL2_MA0635.2 6 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CDX2 1 dataset
ChIP intestinal-cell GSE115314.CDX2.intestinal-cell 64 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 132 bp overlap
DMRTA2 1 dataset
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 180 bp overlap
FOXA1 1 dataset
ChIP LNCaP GSE64656.FOXA1.LNCaP 98 bp overlap
HOXB13 5 datasets
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 55 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 205 bp overlap
ChIP prostate_P29 GSE130408.HOXB13.prostate_P29 56 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 112 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 64 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
LMO2 1 dataset
ChIP H9_DOX-0 GSE137670.LMO2.H9_DOX-0 155 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 133 bp overlap
MSC 1 dataset
Motif DE_12h DE_12h-MSC_MA0665.1 10 bp overlap
MYF5 1 dataset
Motif DE_12h DE_12h-MYF5_MA1641.2 8 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 221 bp overlap
Neurod2 2 datasets
Motif DE_12h DE_12h-Neurod2_MA0668.3 8 bp overlap
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Nfat5 1 dataset
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017025 GSE129039.OLIG2.brain-prefrontal-cortex_2017025 216 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PGR 1 dataset
ChIP endometrium_Midsecretory GSE132712.PGR.endometrium_Midsecretory 261 bp overlap
POU5F1 1 dataset
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
Pgr 1 dataset
Motif DE_12h DE_12h-Pgr_MA2323.1 17 bp overlap
Ptf1A 1 dataset
Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap
RAD21 1 dataset
ChIP neural ENCSR198ZYJ.RAD21.neural 309 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
RFX4 1 dataset
Motif DE_12h DE_12h-RFX4_MA0799.3 13 bp overlap
Rhox11 1 dataset
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 208 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
STAT3 1 dataset
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 183 bp overlap
TCF7L1 1 dataset
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
TFAP4 1 dataset
Motif DE_12h DE_12h-TFAP4_MA0691.1 10 bp overlap
THAP1 1 dataset
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
TLE3 1 dataset
ChIP LNCaP GSE94682.TLE3.LNCaP 69 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Tcf21 1 dataset
Motif DE_12h DE_12h-Tcf21_MA0832.2 10 bp overlap
Tfcp2l1 1 dataset
Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
ZBTB18 1 dataset
Motif DE_12h DE_12h-ZBTB18_MA0698.2 11 bp overlap
ZIC1 1 dataset
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
ZIC4 1 dataset
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
ZIC5 1 dataset
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
ZNF189 1 dataset
Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap
ZNF341 1 dataset
Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap
ZNF384 2 datasets
Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap
ChIP HEK293T ENCFF019DZX 274 bp overlap
ZNF528 1 dataset
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
ZNF667 1 dataset
Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap
ZNF93 1 dataset
ChIP HEK293T GSE78099.ZNF93.HEK293T 130 bp overlap
ZSCAN31 1 dataset
Motif DE_12h DE_12h-ZSCAN31_MA1722.2 18 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Zic2 2 datasets
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap