chr15 : 99,569,055 99,569,394
339 bp 40 TFs 1 linked gene
This 339 bp open chromatin element is linked to MEF2A and is bound by 40 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
MEF2A 3.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:99,564,055 – 99,574,394
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
40 transcription factors
Source
Cell type
AFF1 2 datasets
ChIP SEM_CX4945 GSE90762.AFF1.SEM_CX4945 221 bp overlap
ChIP SEM_DMSO GSE90762.AFF1.SEM_DMSO 339 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 233 bp overlap
ATF3 1 dataset
ChIP liver ENCFF375GID 245 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 170 bp overlap
CDK8 2 datasets
ChIP leiomyoma_PT1063 GSE128230.CDK8.leiomyoma_PT1063 60 bp overlap
ChIP leiomyoma_PT916 GSE128230.CDK8.leiomyoma_PT916 134 bp overlap
E2F8 1 dataset
ChIP GM12878 ENCSR793HVL.E2F8.GM12878 269 bp overlap
ESR1 1 dataset
ChIP breast_tumor_Male_3 GSE104399.ESR1.breast_tumor_Male_3 339 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 118 bp overlap
FOXA1 1 dataset
ChIP breast_tumor_Male_3 GSE104399.FOXA1.breast_tumor_Male_3 339 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_GATA4 GSE90454.FOXA2.BJ1-hTERT_GATA4 175 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 135 bp overlap
ChIP DE DE-FOXA2-1 339 bp overlap
ChIP DE DE-FOXA2-2 339 bp overlap
GATA1 2 datasets
ChIP K-562 GSE107726.GATA1.K-562 109 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 169 bp overlap
GATA2 2 datasets
ChIP TF1 GSE73207.GATA2.TF1 166 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 144 bp overlap
GATA4 5 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 108 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 213 bp overlap
ChIP DE DE-GATA4-1 309 bp overlap
ChIP DE DE-GATA4-2 339 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 339 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 256 bp overlap
ChIP DE DE-GATA6-2 339 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 248 bp overlap
KDM1A 2 datasets
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 301 bp overlap
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 231 bp overlap
KMT2A 9 datasets
ChIP HEK293T_C-term GSE90762.KMT2A.HEK293T_C-term 237 bp overlap
ChIP HEK293T_C-term_C104 GSE90762.KMT2A.HEK293T_C-term_C104 339 bp overlap
ChIP HEK293T_C-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_C-term_shCtrl_TASP1-KO 308 bp overlap
ChIP HEK293T_N-term GSE90762.KMT2A.HEK293T_N-term 339 bp overlap
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 339 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 339 bp overlap
ChIP HEK293T_N-term_shCtrl GSE90762.KMT2A.HEK293T_N-term_shCtrl 339 bp overlap
ChIP RS4-11 GSE38403.KMT2A.RS4-11 238 bp overlap
ChIP SEM GSE83671.KMT2A.SEM 339 bp overlap
MAFK 1 dataset
ChIP A549 ENCFF371EPR 83 bp overlap
MED12 2 datasets
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 76 bp overlap
ChIP leiomyoma_PT916 GSE128230.MED12.leiomyoma_PT916 56 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 284 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 248 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 288 bp overlap
NEUROG2 2 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 111 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 189 bp overlap
POLR2A 1 dataset
ChIP stomach ENCFF820WZN 253 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 125 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 155 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 141 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 173 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 179 bp overlap
RAD21 1 dataset
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 192 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 227 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 331 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 254 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 200 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 339 bp overlap
ZNF121 4 datasets
ChIP HEK293 ENCFF839FUF 339 bp overlap
ChIP HEK293 ENCSR224QDY.ZNF121.HEK293 318 bp overlap
ChIP HEK293 GSE76494.ZNF121.HEK293 241 bp overlap
ChIP WTC11 ENCFF291API 297 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 102 bp overlap
ZNF580 2 datasets
ChIP HEK293 ENCFF906MQV 328 bp overlap
ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 245 bp overlap
ZNF664 2 datasets
ChIP HEK293 ENCFF343XSW 339 bp overlap
ChIP HEK293 ENCSR714LZQ.ZNF664.HEK293 339 bp overlap