chr15 : 82,910,611 – 82,911,202
591 bp 35 TFs 8 linked genes
This 591 bp open chromatin element is linked to 8 target genes and is bound by 35 transcription factors.
Linked Genes
8 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
HOMER2 75.2 kb Distal Multiome
RAMAC 75.2 kb Distal Multiome
C15orf40 100.6 kb Distal Multiome
WHAMM 101.4 kb Distal Multiome
BTBD1 156.3 kb Distal Multiome
AP3B2 201.1 kb Distal Multiome
ENSG00000259986 268.2 kb Distal Multiome
HDGFL3 296.9 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:82,905,611 – 82,916,202
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
35 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP VCaP GSE148358.BRD4.VCaP 181 bp overlap
CEBPA 1 dataset
ChIP SKH1_10d GSE87283.CEBPA.SKH1_10d 141 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 292 bp overlap
ERG 5 datasets
ChIP Jurkat GSE49091.ERG.Jurkat 235 bp overlap
ChIP ME-1 GSE46044.ERG.ME-1 211 bp overlap
ChIP ME-1 GSE46044.ERG.ME-1 201 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 261 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 358 bp overlap
EVI1 1 dataset
ChIP SKH1 GSE87283.EVI1.SKH1 296 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 591 bp overlap
ChIP DE DE-FOXA2-2 591 bp overlap
FOXH1 3 datasets
Motif DE_24h DE_24h-FOXH1_MA0479.2 8 bp overlap
Motif DE_36h DE_36h-FOXH1_MA0479.2 8 bp overlap
Motif DE_60h DE_60h-FOXH1_MA0479.2 8 bp overlap
GATA2 3 datasets
ChIP SKH1 GSE87283.GATA2.SKH1 460 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.GATA2.SKH1_RUNX1-EVI1_KD 354 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 318 bp overlap
GATA3 2 datasets
ChIP Jurkat GSE76181.GATA3.Jurkat 332 bp overlap
ChIP Jurkat GSE68976.GATA3.Jurkat 237 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 591 bp overlap
ChIP DE DE-GATA4-2 591 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 591 bp overlap
ChIP DE DE-GATA6-2 591 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 558 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 591 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 591 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 591 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 591 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 591 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 377 bp overlap
KMT2A 1 dataset
ChIP L826 GSE83671.KMT2A.L826 180 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 331 bp overlap
LMO2 1 dataset
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 270 bp overlap
MYB 5 datasets
ChIP DU528 GSE94000.MYB.DU528 281 bp overlap
ChIP Jurkat GSE59657.MYB.Jurkat 172 bp overlap
ChIP Loucy GSE94000.MYB.Loucy 322 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 223 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 190 bp overlap
POU1F1 3 datasets
Motif DE_24h DE_24h-POU1F1_MA0784.3 14 bp overlap
Motif DE_36h DE_36h-POU1F1_MA0784.3 14 bp overlap
Motif DE_60h DE_60h-POU1F1_MA0784.3 14 bp overlap
POU2F1::SOX2 2 datasets
Motif DE_24h DE_24h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif DE_36h DE_36h-POU2F1SOX2_MA1962.1 17 bp overlap
POU2F2 3 datasets
Motif DE_24h DE_24h-POU2F2_MA0507.3 13 bp overlap
Motif DE_36h DE_36h-POU2F2_MA0507.3 13 bp overlap
Motif DE_60h DE_60h-POU2F2_MA0507.3 13 bp overlap
POU3F1 3 datasets
Motif DE_24h DE_24h-POU3F1_MA0786.2 10 bp overlap
Motif DE_36h DE_36h-POU3F1_MA0786.2 10 bp overlap
Motif DE_60h DE_60h-POU3F1_MA0786.2 10 bp overlap
POU3F2 3 datasets
Motif DE_24h DE_24h-POU3F2_MA0787.1 12 bp overlap
Motif DE_36h DE_36h-POU3F2_MA0787.1 12 bp overlap
Motif DE_60h DE_60h-POU3F2_MA0787.1 12 bp overlap
POU3F3 3 datasets
Motif DE_24h DE_24h-POU3F3_MA0788.1 13 bp overlap
Motif DE_36h DE_36h-POU3F3_MA0788.1 13 bp overlap
Motif DE_60h DE_60h-POU3F3_MA0788.1 13 bp overlap
RUNX1 9 datasets
ChIP Jurkat GSE68976.RUNX1.Jurkat 301 bp overlap
ChIP Jurkat GSE76181.RUNX1.Jurkat 301 bp overlap
ChIP ME-1 GSE117138.RUNX1.ME-1 261 bp overlap
ChIP ME-1 GSE46044.RUNX1.ME-1 325 bp overlap
ChIP ME-1_KD GSE128771.RUNX1.ME-1_KD 261 bp overlap
ChIP SKH1 GSE87283.RUNX1.SKH1 234 bp overlap
ChIP SKH1_10d GSE87283.RUNX1.SKH1_10d 201 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 268 bp overlap
ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 398 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 289 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 591 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 591 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 591 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 591 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 591 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 210 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 474 bp overlap
SPI1 9 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 253 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 219 bp overlap
ChIP DC_LPS GSE123347.SPI1.DC_LPS 105 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 280 bp overlap
ChIP KG-1 GSE128834.SPI1.KG-1 282 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 170 bp overlap
ChIP dendrite GSE58864.SPI1.dendrite 485 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 141 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 109 bp overlap
SUZ12 1 dataset
ChIP K-562 ENCSR412CTM.SUZ12.K-562 117 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 163 bp overlap
TAL1 2 datasets
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 247 bp overlap
ChIP TSU-1621MT GSE60477.TAL1.TSU-1621MT 283 bp overlap
TBX20 3 datasets
Motif DE_24h DE_24h-TBX20_MA0689.1 11 bp overlap
Motif DE_36h DE_36h-TBX20_MA0689.1 11 bp overlap
Motif DE_60h DE_60h-TBX20_MA0689.1 11 bp overlap
ZIM3 1 dataset
ChIP HEK293 GSE76494.ZIM3.HEK293 142 bp overlap
ZNF189 3 datasets
Motif DE_24h DE_24h-ZNF189_MA1725.2 9 bp overlap
Motif DE_36h DE_36h-ZNF189_MA1725.2 9 bp overlap
Motif DE_60h DE_60h-ZNF189_MA1725.2 9 bp overlap
ZNF528 3 datasets
Motif DE_24h DE_24h-ZNF528_MA1597.1 17 bp overlap
Motif DE_36h DE_36h-ZNF528_MA1597.1 17 bp overlap
Motif DE_60h DE_60h-ZNF528_MA1597.1 17 bp overlap
Zic2 3 datasets
Motif DE_24h DE_24h-Zic2_MA1629.2 9 bp overlap
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap
Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap
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