chr13 : 78,239,735 78,240,126
391 bp 37 TFs 0 linked genes
This 391 bp open chromatin element has no linked target genes and is bound by 37 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:78,234,735 – 78,245,126
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
BRD4 3 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 276 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 214 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 241 bp overlap
CDX2 1 dataset
ChIP LS180 GSE31939.CDX2.LS180 138 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 356 bp overlap
CTCF 1 dataset
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 203 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 199 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF346MCV 174 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 69 bp overlap
EP300 1 dataset
ChIP AML GSE131939.EP300.AML 218 bp overlap
GATA6 4 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 252 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 293 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 327 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 352 bp overlap
HNF4A 1 dataset
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 124 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
JMJD1C 1 dataset
ChIP HL-60 GSE63484.JMJD1C.HL-60 157 bp overlap
JUN 2 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 204 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 290 bp overlap
JUND 1 dataset
ChIP Kasumi-1_ctrl GSE117105.JUND.Kasumi-1_ctrl 128 bp overlap
KDM1A 1 dataset
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 232 bp overlap
LDB1 1 dataset
ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 247 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
MAX 1 dataset
ChIP NB4 ENCFF966MWB 277 bp overlap
MEIS1 1 dataset
ChIP SEM GSE38339.MEIS1.SEM 124 bp overlap
NANOG 2 datasets
ChIP WA01 ERP004238.NANOG.WA01 247 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 223 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 203 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 267 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 317 bp overlap
SKI 1 dataset
ChIP HL-60 GSE107553.SKI.HL-60 125 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 124 bp overlap
SMARCA4 4 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 263 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 315 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 353 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 111 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 370 bp overlap
SPI1 7 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 156 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 102 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 145 bp overlap
ChIP HL-60 ENCFF645GBT 182 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 207 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 201 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 208 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
TFAP4 1 dataset
ChIP Kasumi-1 GSE45738.TFAP4.Kasumi-1 321 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
ZNF16 1 dataset
Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap