chr13 : 61,044,457 – 61,045,576

1,119 bp 81 TFs 0 linked genes

This 1.1 kb open chromatin element has no linked target genes and is bound by 81 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

81 transcription factors

AR 13 datasets

ChIP 22Rv1_R1881 GSE80742.AR.22Rv1_R1881 197 bp overlap

ChIP LNCaP_Bag-1L_WT_DHT GSE89938.AR.LNCaP_Bag-1L_WT_DHT 165 bp overlap

ChIP LNCaP_Bag1L_KO_Bag1L_Rescue_DHT_4h GSE89938.AR.LNCaP_Bag1L_KO_Bag1L_Rescue_DHT_4h 167 bp overlap

ChIP LNCaP_DSG GSE114737.AR.LNCaP_DSG 227 bp overlap

ChIP LNCaP_Talen_DHT GSE89938.AR.LNCaP_Talen_DHT 219 bp overlap

ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 170 bp overlap

ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 212 bp overlap

ChIP LNCaP_androgen-Y_hypoxia-N GSE114732.AR.LNCaP_androgen-Y_hypoxia-N 194 bp overlap

ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 239 bp overlap

ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 174 bp overlap

ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 183 bp overlap

ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 219 bp overlap

ChIP prostate-cancer_PDX_78 GSE130408.AR.prostate-cancer_PDX_78 77 bp overlap

ATF2 1 dataset

Motif DE_48h DE_48h-ATF2_MA1632.2 10 bp overlap

BARX1 1 dataset

Motif DE_60h DE_60h-BARX1_MA0875.2 6 bp overlap

BARX2 1 dataset

Motif DE_60h DE_60h-BARX2_MA1471.2 9 bp overlap

BSX 1 dataset

Motif DE_60h DE_60h-BSX_MA0876.2 6 bp overlap

CREB1 1 dataset

Motif DE_48h DE_48h-CREB1_MA0018.5 8 bp overlap

CREBBP 1 dataset

ChIP LS180_125 GSE39277.CREBBP.LS180_125 81 bp overlap

DLX1 1 dataset

Motif DE_60h DE_60h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif DE_60h DE_60h-DLX6_MA0882.2 6 bp overlap

Dlx2 1 dataset

Motif DE_60h DE_60h-Dlx2_MA0885.3 8 bp overlap

Dlx3 1 dataset

Motif DE_60h DE_60h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif DE_60h DE_60h-Dlx4_MA0881.2 6 bp overlap

Dlx5 1 dataset

Motif DE_60h DE_60h-Dlx5_MA1476.3 8 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 173 bp overlap

ERF::HOXB13 1 dataset

Motif DE_60h DE_60h-ERFHOXB13_MA1937.2 13 bp overlap

ERF::NHLH1 1 dataset

Motif DE_60h DE_60h-ERFNHLH1_MA1938.2 16 bp overlap

ESRRG 1 dataset

ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 222 bp overlap

ETV5::FOXI1 1 dataset

Motif DE_60h DE_60h-ETV5FOXI1_MA1946.2 12 bp overlap

ETV5::FOXO1 1 dataset

Motif DE_60h DE_60h-ETV5FOXO1_MA1947.2 10 bp overlap

FEZF2 2 datasets

Motif DE_48h DE_48h-FEZF2_MA2341.1 8 bp overlap

Motif DE_60h DE_60h-FEZF2_MA2341.1 8 bp overlap

FOXA1 3 datasets

ChIP 22Rv1_CST_Crispr GSE123618.FOXA1.22Rv1_CST_Crispr 166 bp overlap

ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 248 bp overlap

ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 182 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 1119 bp overlap

ChIP DE DE-FOXA2-2 1066 bp overlap

GATA1 2 datasets

Motif DE_60h DE_60h-GATA1_MA0035.5 7 bp overlap

ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 81 bp overlap

GATA4 10 datasets

ChIP DE DE-GATA4-1 1119 bp overlap

ChIP DE DE-GATA4-2 1119 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

ChIP G296S GSE85628.GATA4.G296S 446 bp overlap

ChIP G296S GSE85628.GATA4.G296S 268 bp overlap

ChIP G296S_2 GSE85628.GATA4.G296S_2 446 bp overlap

ChIP G296S_2 GSE85628.GATA4.G296S_2 268 bp overlap

ChIP Hep-G2 GSE135714.GATA4.Hep-G2 256 bp overlap

ChIP Hep-G2 GSE135714.GATA4.Hep-G2 231 bp overlap

ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 229 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 1119 bp overlap

ChIP DE DE-GATA6-2 1119 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 587 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 1082 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 485 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 1078 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 736 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 1077 bp overlap

ChIP foregut GSE117136.GATA6.foregut 261 bp overlap

GBX2 1 dataset

Motif DE_60h DE_60h-GBX2_MA0890.2 6 bp overlap

HESX1 1 dataset

Motif DE_60h DE_60h-HESX1_MA0894.2 6 bp overlap

HNF1A 1 dataset

Motif DE_60h DE_60h-HNF1A_MA0046.3 13 bp overlap

HNF1B 1 dataset

Motif DE_60h DE_60h-HNF1B_MA0153.2 13 bp overlap

HOXA6 1 dataset

Motif DE_60h DE_60h-HOXA6_MA1497.2 7 bp overlap

HOXA7 1 dataset

Motif DE_60h DE_60h-HOXA7_MA1498.3 6 bp overlap

HOXB6 1 dataset

Motif DE_60h DE_60h-HOXB6_MA1500.2 7 bp overlap

HOXB7 1 dataset

Motif DE_60h DE_60h-HOXB7_MA1501.2 7 bp overlap

HOXB8 1 dataset

Motif DE_60h DE_60h-HOXB8_MA1502.2 7 bp overlap

HOXD8 1 dataset

Motif DE_60h DE_60h-HOXD8_MA0910.3 7 bp overlap

Hand1::Tcf3 2 datasets

Motif DE_60h DE_60h-Hand1Tcf3_MA0092.2 9 bp overlap

Hmx1 1 dataset

Motif DE_60h DE_60h-Hmx1_MA0896.2 9 bp overlap

Hmx3 1 dataset

Motif DE_60h DE_60h-Hmx3_MA0898.2 9 bp overlap

IRF2 1 dataset

Motif DE_60h DE_60h-IRF2_MA0051.2 16 bp overlap

IRF3 1 dataset

Motif DE_60h DE_60h-IRF3_MA1418.2 17 bp overlap

Isl1 1 dataset

Motif DE_60h DE_60h-Isl1_MA1608.2 7 bp overlap

Jun 1 dataset

Motif DE_60h DE_60h-Jun_MA0489.3 8 bp overlap

LBX2 1 dataset

Motif DE_60h DE_60h-LBX2_MA0699.2 6 bp overlap

LDB1 1 dataset

ChIP HEP GSE52637.LDB1.HEP 130 bp overlap

LHX2 1 dataset

Motif DE_60h DE_60h-LHX2_MA0700.3 6 bp overlap

MEF2A 2 datasets

Motif DE_48h DE_48h-MEF2A_MA0052.5 10 bp overlap

Motif DE_60h DE_60h-MEF2A_MA0052.5 10 bp overlap

MEF2C 3 datasets

Motif DE_48h DE_48h-MEF2C_MA0497.2 11 bp overlap

Motif DE_60h DE_60h-MEF2C_MA0497.2 11 bp overlap

MEIS1 1 dataset

Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap

MSX1 1 dataset

Motif DE_60h DE_60h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif DE_60h DE_60h-MSX2_MA0708.3 6 bp overlap

Msgn1 2 datasets

Motif DE_48h DE_48h-Msgn1_MA1524.3 10 bp overlap

Motif DE_60h DE_60h-Msgn1_MA1524.3 10 bp overlap

Msx3 1 dataset

Motif DE_60h DE_60h-Msx3_MA0709.2 6 bp overlap

NKX6-3 1 dataset

Motif DE_60h DE_60h-NKX6-3_MA1530.2 8 bp overlap

Nobox 1 dataset

Motif DE_60h DE_60h-Nobox_MA0125.2 6 bp overlap

RAX 1 dataset

Motif DE_60h DE_60h-RAX_MA0718.2 6 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 1119 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 624 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 404 bp overlap

SMAD2_3 4 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 348 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 551 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 1119 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 1103 bp overlap

SMARCA2 1 dataset

ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 225 bp overlap

SMARCA4 1 dataset

ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 192 bp overlap

SOX12 2 datasets

Motif DE_48h DE_48h-SOX12_MA1561.2 10 bp overlap

Motif DE_60h DE_60h-SOX12_MA1561.2 10 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 336 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 542 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 246 bp overlap

Sox11 2 datasets

Motif DE_48h DE_48h-Sox11_MA0869.3 8 bp overlap

Motif DE_60h DE_60h-Sox11_MA0869.3 8 bp overlap

Sox17 2 datasets

Motif DE_48h DE_48h-Sox17_MA0078.3 10 bp overlap

Motif DE_60h DE_60h-Sox17_MA0078.3 10 bp overlap

Sox6 2 datasets

Motif DE_48h DE_48h-Sox6_MA0515.1 10 bp overlap

Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap

Sox7 2 datasets

Motif DE_48h DE_48h-Sox7_MA2095.1 10 bp overlap

Motif DE_60h DE_60h-Sox7_MA2095.1 10 bp overlap

TAL1 1 dataset

ChIP CHRF28811 ERP008568.TAL1.CHRF28811 160 bp overlap

TBX5 2 datasets

ChIP G296S GSE85628.TBX5.G296S 97 bp overlap

ChIP G296S_2 GSE85628.TBX5.G296S_2 97 bp overlap

VENTX 1 dataset

Motif DE_60h DE_60h-VENTX_MA0724.1 9 bp overlap

Yy1 1 dataset

Motif DE_60h DE_60h-Yy1_MA0095.4 8 bp overlap

ZBTB32 1 dataset

Motif DE_60h DE_60h-ZBTB32_MA1580.1 10 bp overlap

ZFP42 1 dataset

Motif DE_60h DE_60h-ZFP42_MA1651.2 13 bp overlap

ZNF19 1 dataset

ChIP HEK293T GSE78099.ZNF19.HEK293T 294 bp overlap

ZNF214 1 dataset

Motif DE_60h DE_60h-ZNF214_MA1975.2 13 bp overlap

ZNF354A 1 dataset

Motif DE_60h DE_60h-ZNF354A_MA1978.2 20 bp overlap

ZNF384 2 datasets

Motif DE_48h DE_48h-ZNF384_MA1125.2 8 bp overlap

Motif DE_60h DE_60h-ZNF384_MA1125.2 8 bp overlap

ZNF410 1 dataset

Motif DE_60h DE_60h-ZNF410_MA0752.2 16 bp overlap

ZNF652 1 dataset

ChIP Hep-G2 ENCSR502GAX.ZNF652.Hep-G2 98 bp overlap

ZNF708 1 dataset

Motif DE_48h DE_48h-ZNF708_MA1730.2 9 bp overlap

ZSCAN4 1 dataset

Motif DE_48h DE_48h-ZSCAN4_MA1155.1 15 bp overlap