chr12 : 95,857,246 95,857,510
264 bp 33 TFs 2 linked genes
This 264 bp open chromatin element is linked to SNRPF-DT and SNRPF and is bound by 33 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
SNRPF-DT 1.3 kb Proximal Proximity
SNRPF 1.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:95,852,246 – 95,862,510
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
33 transcription factors
Source
Cell type
CTCF 1 dataset
Motif DE_24h DE_24h-CTCF_MA1929.2 31 bp overlap
DR1 1 dataset
ChIP HepG2 ENCFF818WYO 264 bp overlap
DRAP1 1 dataset
ChIP Hep-G2 ENCSR765MKZ.DRAP1.Hep-G2 212 bp overlap
HMGXB3 1 dataset
ChIP HepG2 ENCFF161CYU 264 bp overlap
IRF2 1 dataset
Motif DE_12h DE_12h-IRF2_MA0051.2 16 bp overlap
IRF7 1 dataset
Motif DE_12h DE_12h-IRF7_MA0772.2 13 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
KLF13 1 dataset
Motif DE_12h DE_12h-KLF13_MA0657.2 17 bp overlap
MAZ 4 datasets
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
Motif DE_24h DE_24h-MAZ_MA1522.2 8 bp overlap
Motif ES_0h ES_0h-MAZ_MA1522.2 8 bp overlap
MYB 1 dataset
Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap
NFYA 3 datasets
Motif DE_12h DE_12h-NFYA_MA0060.4 8 bp overlap
Motif DE_24h DE_24h-NFYA_MA0060.4 8 bp overlap
Motif ES_0h ES_0h-NFYA_MA0060.4 8 bp overlap
NFYB 4 datasets
Motif DE_24h DE_24h-NFYB_MA0502.3 9 bp overlap
ChIP Hep-G2 ENCSR935GZV.NFYB.Hep-G2 264 bp overlap
ChIP HepG2 ENCFF174VYX 264 bp overlap
ChIP K-562 ENCSR000EGQ.NFYB.K-562 209 bp overlap
NFYC 5 datasets
Motif DE_12h DE_12h-NFYC_MA1644.2 7 bp overlap
Motif DE_24h DE_24h-NFYC_MA1644.2 7 bp overlap
Motif ES_0h ES_0h-NFYC_MA1644.2 7 bp overlap
ChIP Hep-G2 ENCSR569ARC.NFYC.Hep-G2 201 bp overlap
ChIP HepG2 ENCFF836FYP 264 bp overlap
NONO 2 datasets
ChIP Hep-G2 GSE120104.NONO.Hep-G2 183 bp overlap
ChIP HepG2 ENCFF819JPN 264 bp overlap
PATZ1 3 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif DE_24h DE_24h-PATZ1_MA1961.2 11 bp overlap
Motif ES_0h ES_0h-PATZ1_MA1961.2 11 bp overlap
PBX1 3 datasets
Motif DE_12h DE_12h-PBX1_MA0070.2 9 bp overlap
Motif DE_24h DE_24h-PBX1_MA0070.2 9 bp overlap
Motif ES_0h ES_0h-PBX1_MA0070.2 9 bp overlap
POLR2G 2 datasets
ChIP HepG2 ENCFF241AEG 254 bp overlap
ChIP HepG2 ENCFF508UTS 264 bp overlap
SP5 3 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
Six3 1 dataset
Motif DE_12h DE_12h-Six3_MA0631.2 11 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
TAF1 3 datasets
ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 104 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 94 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 115 bp overlap
TBP 6 datasets
ChIP H1 ENCFF859IIO 245 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 136 bp overlap
ChIP hESC GSE122298.TBP.hESC 199 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 245 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 229 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 142 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 164 bp overlap
ZNF148 3 datasets
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
Motif DE_24h DE_24h-ZNF148_MA1653.2 10 bp overlap
Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap
ZNF281 3 datasets
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Motif DE_24h DE_24h-ZNF281_MA1630.3 10 bp overlap
Motif ES_0h ES_0h-ZNF281_MA1630.3 10 bp overlap
ZNF320 1 dataset
Motif DE_24h DE_24h-ZNF320_MA1976.2 20 bp overlap
ZNF692 1 dataset
Motif DE_12h DE_12h-ZNF692_MA1986.2 8 bp overlap
ZNF8 1 dataset
Motif DE_12h DE_12h-ZNF8_MA1718.1 20 bp overlap